RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 PFKLP17858 780 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 PTPN1P18031 435 aaKnown RBP18.5■□□□□ 0.55
CIRBP-235ENST00000591935 CDH8P55286 799 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 USP46P62068 366 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 CLDN10P78369 228 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 RUNX3Q13761 415 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 PON2Q15165 354 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 PDGFRLQ15198 375 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 HSP90AA4PQ58FG1 418 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 IRF2BP1Q8IU81 584 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 SLC9A9Q8IVB4 645 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 DCLK2Q8N568 766 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 DUSP9Q99956 384 aaKnown RBP18.5■□□□□ 0.55
CIRBP-235ENST00000591935 SRRTQ9BXP5 876 aaKnown RBP18.5■□□□□ 0.55
CIRBP-235ENST00000591935 EPC1Q9H2F5 836 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 TRPC7Q9HCX4 862 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
CIRBP-235ENST00000591935 HELZP42694 1942 aaKnown RBP18.5■□□□□ 0.55
CIRBP-235ENST00000591935 C2orf78A6NCI8 922 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 PDXKO00764 312 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 TEX33O43247 280 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 VNN1O95497 513 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 NR3C1P04150 777 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 TDGF1P13385 188 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 PPP3CCP48454 512 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 CACNA2D1P54289 1103 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 FOXK2Q01167 660 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 LRRC63Q05C16 580 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 Q6ZS52 159 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 GPR161Q8N6U8 529 aaKnown RBP18.49■□□□□ 0.55
CIRBP-235ENST00000591935 ARL14EPQ8N8R7 260 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-235ENST00000591935 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 CHFRQ96EP1 664 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 EBF3Q9H4W6 596 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 SMYD3Q9H7B4 428 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 VRTNQ9H8Y1 702 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 GCNT4Q9P109 453 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 MAPK8IP1Q9UQF2 711 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 PAXBP1Q9Y5B6 917 aa18.49■□□□□ 0.55
CIRBP-235ENST00000591935 MYH10P35580 1976 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 CLDN5O00501 218 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 PAPSS2O95340 614 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-235ENST00000591935 CKMP06732 381 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 TNNT1P13805 278 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 ARSAP15289 507 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 HOXC13P31276 330 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 RAP1GAPP47736 663 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 SATB1Q01826 763 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.552e-8■■□□□ 12.5
CIRBP-235ENST00000591935 BIRC3Q13489 604 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 C1orf220Q5T0J3 134 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 ANKRD40Q6AI12 368 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 CNGA4Q8IV77 575 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 C8orf48Q96LL4 319 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 BAG1Q99933 345 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-235ENST00000591935 B3GNT5Q9BYG0 378 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 ELOVL4Q9GZR5 314 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 SDCBP2Q9H190 292 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 C2orf42Q9NWW7 574 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 NCDNQ9UBB6 729 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 GPR179Q6PRD1 2367 aa18.48■□□□□ 0.55
CIRBP-235ENST00000591935 TRIM49BA6NDI0 452 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 GOLGA6L9A6NEM1 432 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 LGALS16A8MUM7 142 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 A8MXQ7 604 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 F8VP50 259 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 ZSCAN12O43309 604 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 ID4P47928 161 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 PMS1P54277 932 aaKnown RBP18.47■□□□□ 0.55
CIRBP-235ENST00000591935 NOP14P78316 857 aaKnown RBP18.47■□□□□ 0.55
CIRBP-235ENST00000591935 NCOA4Q13772 614 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 CCINQ13939 588 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 MTF1Q14872 753 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 CEP135Q66GS9 1140 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 E4F1Q66K89 784 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-235ENST00000591935 TMEM139Q8IV31 216 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 TTC16Q8NEE8 873 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 IQCDQ96DY2 449 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 TSG101Q99816 390 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 TRPM5Q9NZQ8 1165 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 RAB23Q9ULC3 237 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 SMG5Q9UPR3 1016 aaKnown RBP18.47■□□□□ 0.55
CIRBP-235ENST00000591935 DMXL1Q9Y485 3027 aa18.47■□□□□ 0.55
CIRBP-235ENST00000591935 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ATG13O75143 517 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 P4HA1P13674 534 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 TCF3P15923 654 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 HDCP19113 662 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 FECHP22830 423 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 CNR2P34972 360 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ZXDBP98169 803 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ZNF77Q15935 545 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ZNF699Q32M78 642 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ZACNQ401N2 412 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 ZNF667Q5HYK9 610 aa18.46■□□□□ 0.55
CIRBP-235ENST00000591935 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms