RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SAMSN1Q9NSI8 373 aaKnown RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 DUS2Q9NX74 493 aaKnown RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 SMPD4Q9NXE4 827 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 NDRG2Q9UN36 371 aaKnown RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 GTPBP10A4D1E9 387 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 LEFTY2O00292 366 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 MED7O43513 233 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 PI15O43692 258 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 LETM1O95202 739 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 DCNP07585 359 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 SLC9A1P19634 815 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 BRD2P25440 801 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 NUBP1P53384 320 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 BST2Q10589 180 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 MTF1Q14872 753 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TCP11X2Q5H9J9 407 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 FKBP15Q5T1M5 1219 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 IER5LQ5T953 404 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 C1orf228Q6PIY5 440 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TRIM65Q6PJ69 517 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TADA2BQ86TJ2 420 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 ARHGAP18Q8N392 663 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 CPA6Q8N4T0 437 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TMEM105Q8N8V8 129 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-227ENST00000591849 LRRC3BQ96PB8 259 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 SLC22A12Q96S37 553 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 UBXN6Q9BZV1 441 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 FOXQ1Q9C009 403 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 PNPLA8Q9NP80 782 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TAB2Q9NYJ8 693 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 NAGPAQ9UK23 515 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 TSPAN16Q9UKR8 245 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 ARHGAP26Q9UNA1 814 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 SCML2Q9UQR0 700 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 CPQQ9Y646 472 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 DOCK8Q8NF50 2099 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 NOTCH4Q99466 2003 aa10.62□□□□□ -0.71
BRCA1-227ENST00000591849 FAM186AA6NE01 2351 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 M0QYV0 167 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 SLC9A3R1O14745 358 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 THAP12O43422 761 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 TLR5O60602 858 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 SETSIPP0DME0 302 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 IRF1P10914 325 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RARGP13631 454 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 PON1P27169 355 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 PSEN1P49768 467 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 TKTL1P51854 596 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 KIF11P52732 1056 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 SLC7A9P82251 487 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 MYL5Q02045 173 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 TYRO3Q06418 890 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 TNK2Q07912 1038 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 PDE4CQ08493 712 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 GOLGA8FQ08AF8 430 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 GOLGA8DPQ0D2H9 430 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RUNX3Q13761 415 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 CNGA2Q16280 664 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 C10orf120Q5SQS8 335 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 CWF19L1Q69YN2 538 aaKnown RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 GJB7Q6PEY0 223 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 C11orf57Q6ZUT1 292 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RSRC2Q7L4I2 434 aaKnown RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 GPRIN1Q7Z2K8 1008 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 PIGZQ86VD9 579 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RALGPS2Q86X27 583 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 SIX6OS1Q8N1H7 587 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 DTWD2Q8NBA8 298 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 PJA1Q8NG27 643 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 ATP2A3Q93084 1043 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 MSANTD3Q96H12 275 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 KREMEN1Q96MU8 473 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RNF38Q9H0F5 515 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 VPS16Q9H269 839 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 EBF3Q9H4W6 596 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 LTB4R2Q9NPC1 389 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 FANCLQ9NW38 375 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 GTSE1Q9NYZ3 720 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 IL37Q9NZH6 218 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 TMEM63CQ9P1W3 806 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 CFAP97Q9P2B7 532 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 APEX2Q9UBZ4 518 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 WNT6Q9Y6F9 365 aa10.61□□□□□ -0.71
BRCA1-227ENST00000591849 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
BRCA1-227ENST00000591849 NCANO14594 1321 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 A0A1W2PQH9 124 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 HHLA1C9JL84 531 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
BRCA1-227ENST00000591849 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-227ENST00000591849 O00370 1275 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms