RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 ERLEC1Q96DZ1 483 aa16.96■□□□□ 0.31
DDX39A-216ENST00000591275 EHD2Q9NZN4 543 aa16.96■□□□□ 0.31
DDX39A-216ENST00000591275 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
DDX39A-216ENST00000591275 SLC6A14Q9UN76 642 aa16.96■□□□□ 0.31
DDX39A-216ENST00000591275 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
DDX39A-216ENST00000591275 A0A0A0MRY4 1105 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 TBC1D3BA6NDS4 549 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 AP5Z1O43299 807 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 TNNC2P02585 160 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 WARSP23381 471 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 DPP6P42658 865 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 WASP42768 502 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 TNFRSF4P43489 277 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 TDRD10Q5VZ19 366 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 LARP1BQ659C4 914 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 SV2BQ7L1I2 683 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 KIAA1958Q8N8K9 716 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 C8orf48Q96LL4 319 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 CEP295NLQ96MC4 621 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 SLITRK1Q96PX8 696 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 MRPL45Q9BRJ2 306 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 OLFML3Q9NRN5 406 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 TMEM30AQ9NV96 361 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
DDX39A-216ENST00000591275 GCN1Q92616 2671 aaKnown RBP16.95■□□□□ 0.3
DDX39A-216ENST00000591275 UPK3BL1B0FP48 263 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-216ENST00000591275 UPK3BL2E5RIL1 263 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 TAF4O00268 1085 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 OPHN1O60890 802 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
DDX39A-216ENST00000591275 GABRG2P18507 467 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 PPP3CCP48454 512 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CBWD2Q8IUF1 395 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 MINDY1Q8N5J2 469 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 ZNF513Q8N8E2 541 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CEP76Q8TAP6 659 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 SNX25Q9H3E2 840 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CALCOCO1Q9P1Z2 691 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 TBC1D14Q9P2M4 693 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 CLIC4Q9Y696 253 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 LAMA5O15230 3695 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 LOC400499M0QZD8 3231 aa16.94■□□□□ 0.3
DDX39A-216ENST00000591275 PCDH15Q96QU1 1955 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 SERPINF2P08697 491 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 RDXP35241 583 aaKnown RBP16.93■□□□□ 0.3
DDX39A-216ENST00000591275 HOXD12P35452 270 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 GNL1P36915 607 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-216ENST00000591275 GAD2Q05329 585 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 ZNF33AQ06730 810 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 RABEP1Q15276 862 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 C10orf76Q5T2E6 689 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 DDX42Q86XP3 938 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDX39A-216ENST00000591275 OR6B3Q8NGW1 331 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 CLIC6Q96NY7 704 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 DPEP3Q9H4B8 488 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 PANK4Q9NVE7 773 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 ACACAQ13085 2346 aa16.93■□□□□ 0.3
DDX39A-216ENST00000591275 E2F8A0AVK6 867 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 ZNF233A6NK53 670 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 H0Y626 953 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 CLDN5O00501 218 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 TRIM24O15164 1050 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 COCHO43405 550 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 TULP3O75386 442 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 TRIM16O95361 564 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 CD59P13987 128 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 HOXB2P14652 356 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 PTPN1P18031 435 aaKnown RBP16.92■□□□□ 0.3
DDX39A-216ENST00000591275 ALCAMQ13740 583 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 ANO4Q32M45 955 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 BTBD8Q5XKL5 378 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 SLC36A4Q6YBV0 504 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 SLC41A1Q8IVJ1 513 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 ETFBKMTQ8IXQ9 262 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 GLIS3Q8NEA6 775 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 FBXO32Q969P5 355 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 ZFRQ96KR1 1074 aaKnown RBP16.92■□□□□ 0.3
DDX39A-216ENST00000591275 CAMK1GQ96NX5 476 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 DEC1Q9P2X7 70 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 FBXO2Q9UK22 296 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-216ENST00000591275 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 APC2O95996 2303 aa16.92■□□□□ 0.3
DDX39A-216ENST00000591275 IGHV1OR15-9A0A0B4J2B8 117 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
DDX39A-216ENST00000591275 CST3P01034 146 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-216ENST00000591275 IRF1P10914 325 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms