RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 B4GALT3O60512 393 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 DAB1O75553 588 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 TJP3O95049 919 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 GJB5O95377 273 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 ZBED1O96006 694 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 FGGP02679 453 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 URODP06132 367 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 IGFBP6P24592 240 aaPredicted RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 GBP1P32455 592 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 GLUD2P49448 558 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 AIF1P55008 147 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 DEFB103AP81534 67 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 PSMD5Q16401 504 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 PTPROQ16827 1216 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 STRADAQ7RTN6 431 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 JOSD2Q8TAC2 188 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 DPF3Q92784 378 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 RAD9AQ99638 391 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 LPIN3Q9BQK8 851 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 DDX23Q9BUQ8 820 aaKnown RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 ABI2Q9NYB9 513 aaPredicted RBP13.6□□□□□ -0.23
PTBP1-216ENST00000590887 EFR3BQ9Y2G0 817 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 F8VP50 259 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 PIK3R2O00459 728 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 DAOAP59103 153 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 PDK2Q15119 407 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 PM20D1Q6GTS8 502 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 SLC13A5Q86YT5 568 aaPredicted RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 PSTKQ8IV42 348 aaKnown RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 NUP93Q8N1F7 819 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 EMC1Q8N766 993 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 TEKT4Q8WW24 435 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 KRT35Q92764 455 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 VWCEQ96DN2 955 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 ULBP1Q9BZM6 244 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 SLITRK6Q9H5Y7 841 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 MRPL17Q9NRX2 175 aaKnown RBP13.59□□□□□ -0.23
PTBP1-216ENST00000590887 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
PTBP1-216ENST00000590887 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 TBC1D4O60343 1298 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 LPXNO60711 386 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 ERLIN1O75477 346 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 BEST1O76090 585 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 GJB6O95452 261 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 TRUB2O95900 331 aaKnown RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 LTFP02788 710 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 KRT1P04264 644 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 MIPP30301 263 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 CHRNA3P32297 505 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 ELF1P32519 619 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 PSEN1P49768 467 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 ARPP19P56211 112 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 DSG1Q02413 1049 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 LMNB2Q03252 620 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 ARL13BQ3SXY8 428 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 CCDC14Q49A88 953 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 C8orf74Q6P047 294 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 KCTD6Q8NC69 237 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 GRK7Q8WTQ7 553 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 KCNK16Q96T55 309 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 TRIM7Q9C029 511 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.58□□□□□ -0.241e-8■■■■■ 28.9
PTBP1-216ENST00000590887 RASAL2Q9UJF2 1139 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 MRPL42Q9Y6G3 142 aaKnown RBP13.58□□□□□ -0.24
PTBP1-216ENST00000590887 USP3Q9Y6I4 520 aa13.58□□□□□ -0.24
PTBP1-216ENST00000590887 PTPRDP23468 1912 aa13.57□□□□□ -0.24
PTBP1-216ENST00000590887 ALPK3Q96L96 1907 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms