RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 DNAI2Q9GZS0 605 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 LINC00597Q9H2U6 94 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 CCSER2Q9H7U1 834 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 PNPLA8Q9NP80 782 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 SCML2Q9UQR0 700 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 MRPS17Q9Y2R5 130 aaKnown RBP23.61■■□□□ 1.37
MBD3-208ENST00000590830 CPQQ9Y646 472 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 WNT6Q9Y6F9 365 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 COCHO43405 550 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 CALCAP01258 141 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 CTHP32929 405 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 PDE6CP51160 858 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 KIF11P52732 1056 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 RUNX3Q13761 415 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 HECTD3Q5T447 861 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 ANKRD52Q8NB46 1076 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 OSCP1Q8WVF1 389 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 ZSWIM1Q9BR11 485 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 FBXO44Q9H4M3 255 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 FAM86C1Q9NVL1 165 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 OSER1Q9NX31 292 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 SMPD4Q9NXE4 827 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 CACNA1HO95180 2353 aa23.6■■□□□ 1.37
MBD3-208ENST00000590830 TULP2O00295 520 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 YWHAEP62258 255 aaKnown RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 PDGFRLQ15198 375 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 ANGPT1Q15389 498 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 CC2D1AQ6P1N0 951 aaPredicted RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 RALGPS2Q86X27 583 aaPredicted RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 MAML2Q8IZL2 1156 aaPredicted RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 TFAP2BQ92481 460 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 ZFRQ96KR1 1074 aaKnown RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 CRACR2AQ9BSW2 395 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 UBXN6Q9BZV1 441 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 THAP9Q9H5L6 903 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 LMAN1LQ9HAT1 526 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 NMUR1Q9HB89 426 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 DUS2Q9NX74 493 aaKnown RBP23.59■■□□□ 1.37
MBD3-208ENST00000590830 PCDHB4Q9Y5E5 795 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 USP3Q9Y6I4 520 aa23.59■■□□□ 1.37
MBD3-208ENST00000590830 KIF26AQ9ULI4 1882 aaPredicted RBP23.58■■□□□ 1.37
MBD3-208ENST00000590830 CYP26A1O43174 497 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 CHRNB1P11230 501 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 VDRP11473 427 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 APBA1Q02410 837 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 GCNT1Q02742 428 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 GOLGA7BQ2TAP0 167 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 EML3Q32P44 896 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 SGO2Q562F6 1265 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 TMEM270Q6UE05 265 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 SCD5Q86SK9 330 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 PIGZQ86VD9 579 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 TSPAN16Q9UKR8 245 aa23.58■■□□□ 1.37
MBD3-208ENST00000590830 GOLGA6L22H0YM25 854 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 O00370 1275 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 TBX18O95935 607 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 MBL2P11226 248 aaPredicted RBP23.57■■□□□ 1.36
MBD3-208ENST00000590830 CD19P15391 556 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 SLC9A1P19634 815 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 RPS9P46781 194 aaKnown RBP23.57■■□□□ 1.36
MBD3-208ENST00000590830 TUBP50607 506 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 ZNF132P52740 706 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 TPD52L1Q16890 204 aaPredicted RBP23.57■■□□□ 1.36
MBD3-208ENST00000590830 HSP90AA4PQ58FG1 418 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 C1orf210Q8IVY1 113 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 UBA3Q8TBC4 463 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 ATOH1Q92858 354 aaPredicted RBP23.57■■□□□ 1.36
MBD3-208ENST00000590830 WBP2Q969T9 261 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 MSANTD3Q96H12 275 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 DACH1Q9UI36 760 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 KIAA1257Q9ULG3 409 aa23.57■■□□□ 1.36
MBD3-208ENST00000590830 A0A1W2PQH9 124 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 SCAMP3O14828 347 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 NCAM2O15394 837 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 PAEPP09466 180 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 MTIF2P46199 727 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 PDE4CQ08493 712 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 PON2Q15165 354 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 PKDCCQ504Y2 493 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 CT47A1Q5JQC4 288 aaPredicted RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 RAB41Q5JT25 222 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 NAIF1Q69YI7 327 aaPredicted RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 GJB7Q6PEY0 223 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 ECT2Q9H8V3 914 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 FBRSL1Q9HCM7 1045 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 UBE2TQ9NPD8 197 aaPredicted RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 TLR8Q9NR97 1041 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 SAMSN1Q9NSI8 373 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 RBM12Q9NTZ6 932 aaKnown RBP23.56■■□□□ 1.36
MBD3-208ENST00000590830 CFAP97Q9P2B7 532 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 CNTN6Q9UQ52 1028 aa23.56■■□□□ 1.36
MBD3-208ENST00000590830 TLR5O60602 858 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 IFNAR2P48551 515 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 GAS6Q14393 721 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 LCLAT1Q6UWP7 414 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 CCDC186Q7Z3E2 898 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 RBBP8NLQ8NC74 664 aaPredicted RBP23.55■■□□□ 1.36
MBD3-208ENST00000590830 IRF2BPLQ9H1B7 796 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 CYLDQ9NQC7 956 aa23.55■■□□□ 1.36
MBD3-208ENST00000590830 SPATA6Q9NWH7 488 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms