RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CEP250Q9BV73 2442 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 A0A1W2PQC6 194 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 F8VZ95 297 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 POU2F2P09086 479 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 VDRP11473 427 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 CLCN1P35523 988 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 RPS9P46781 194 aaKnown RBP22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 EPHB3P54753 998 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 GOLGA7BQ2TAP0 167 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 SGO2Q562F6 1265 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 VSTM1Q6UX27 236 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 FAM71AQ8IYT1 594 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 CORO1BQ9BR76 489 aa22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 FAM126AQ9BYI3 521 aaPredicted RBP22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 ZNF334Q9HCZ1 680 aaPredicted RBP22.71■■□□□ 1.23
R3HDM4-206ENST00000590454 O00370 1275 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 TARSP26639 723 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 MAP3K7CLP57077 242 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 JAM2P57087 298 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 RPL10AP62906 217 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 ZNF852Q6ZMS4 543 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 CLEC20AQ6ZU45 233 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 TPRG1Q6ZUI0 275 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 DNAJB7Q7Z6W7 309 aaPredicted RBP22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 TTC30AQ86WT1 665 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 PSMG2Q969U7 264 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 SMARCD1Q96GM5 515 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 ZNF512Q96ME7 567 aaPredicted RBP22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 LRRC3Q9BY71 257 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 GMEB2Q9UKD1 530 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 MRPS17Q9Y2R5 130 aaKnown RBP22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 MYH10P35580 1976 aa22.7■■□□□ 1.22
R3HDM4-206ENST00000590454 GREB1Q4ZG55 1949 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 MIA3Q5JRA6 1907 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 ATP8B3O60423 1300 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 DCDC2BA2VCK2 349 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 SLC38A8A6NNN8 435 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 FAM200BP0CF97 657 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 HMGA1P17096 107 aaKnown RBP22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 CCR2P41597 374 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 USP46P62068 366 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 PLD1Q13393 1074 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 SLC5A9Q2M3M2 681 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 PABPC1LQ4VXU2 614 aaKnown RBP22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 TSSK4Q6SA08 328 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 SLC47A2Q86VL8 602 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 TMC8Q8IU68 726 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 NPAS3Q8IXF0 933 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 TCEAL4Q96EI5 215 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 C8orf48Q96LL4 319 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 CSNK1G1Q9HCP0 422 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 PRMT8Q9NR22 394 aaPredicted RBP22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 TSPAN16Q9UKR8 245 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 CACNA1BQ00975 2339 aa22.69■■□□□ 1.22
R3HDM4-206ENST00000590454 COL4A3Q01955 1670 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 GPR179Q6PRD1 2367 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 TULP2O00295 520 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 ECI2O75521 394 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 RHOP08100 348 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 PTPN2P17706 415 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 TRIM21P19474 475 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 TGM1P22735 817 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 PLCB2Q00722 1185 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 POTEHQ6S545 545 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 GPRIN1Q7Z2K8 1008 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 UBA3Q8TBC4 463 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 DUSP16Q9BY84 665 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 DNAI2Q9GZS0 605 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 DMAP1Q9NPF5 467 aaPredicted RBP22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 KIAA1257Q9ULG3 409 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 FRYLO94915 3013 aa22.68■■□□□ 1.22
R3HDM4-206ENST00000590454 HHLA1C9JL84 531 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 TRIM66O15016 1216 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 GFPT2O94808 682 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 MICAL2O94851 1124 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 GJA1P17302 382 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 GNA15P30679 374 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 LCLAT1Q6UWP7 414 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 ELMOD1Q8N336 334 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 ANKRD52Q8NB46 1076 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 ZNF606Q8WXB4 792 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 BAP1Q92560 729 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 SPATA17Q96L03 361 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 ANP32EQ9BTT0 268 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 TTYH3Q9C0H2 523 aa22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 MAGED2Q9UNF1 606 aaPredicted RBP22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 MRPS23Q9Y3D9 190 aaKnown RBP22.67■■□□□ 1.22
R3HDM4-206ENST00000590454 PATJQ8NI35 1801 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 TNFRSF10BO14763 440 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 THAP12O43422 761 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 MOSPD3O75425 235 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 MYL4P12829 197 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 ANXA13P27216 316 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 SOX5P35711 763 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 EPHA5P54756 1037 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 FZD5Q13467 585 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 VEPH1Q14D04 833 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 CNGA2Q16280 664 aa22.66■■□□□ 1.22
R3HDM4-206ENST00000590454 PKDCCQ504Y2 493 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms