RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SCNN1GP51170 649 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 EFHC1Q5JVL4 640 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 TXNRD3NBQ6F5E7 133 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 LRRC6Q86X45 466 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 GLT1D1Q96MS3 346 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 PAFAH2Q99487 392 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 RPS6KL1Q9Y6S9 549 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 GLI3P10071 1580 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 JCHAINP01591 159 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 MMP8P22894 467 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 KDELR1P24390 212 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ELF1P32519 619 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PSEN2P49810 448 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 HABP4Q5JVS0 413 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 SH3PXD2AQ5TCZ1 1133 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 FAM183BPQ6ZVS7 135 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 RAB3IPQ96QF0 476 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ACTR5Q9H9F9 607 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 HMGXB4Q9UGU5 601 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 MYH1P12882 1939 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 LOC100653049A0A140TA62 436 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 NEMP1O14524 444 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 KRT34O76011 436 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ENDOD1O94919 500 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 USP17L7P0C7H9 530 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 STIP1P31948 543 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 DCAF12L1Q5VU92 463 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 RASSF3Q86WH2 238 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 VCPIP1Q96JH7 1222 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 SERPINB12Q96P63 405 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 SLITRK1Q96PX8 696 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 NUDCD1Q96RS6 583 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PFDN4Q9NQP4 134 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 BCAT1P54687 386 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 GEMIN4P57678 1058 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 NR1H3Q13133 447 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 USP6NLQ92738 828 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PRDM5Q9NQX1 630 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 CREB1P16220 341 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 CASP2P42575 452 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ALDH18A1P54886 795 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 EML3Q32P44 896 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 WDR75Q8IWA0 830 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 GABPB2Q8TAK5 448 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 CPSF2Q9P2I0 782 aaKnown RBP15.15■□□□□ 0.02
RETREG3-208ENST00000589797 FAM8A1Q9UBU6 413 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 PRDM4Q9UKN5 801 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 MYH15Q9Y2K3 1946 aa15.15■□□□□ 0.02
RETREG3-208ENST00000589797 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 TRPA1O75762 1119 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 BDNFP23560 247 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 PCSK1P29120 753 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 RTP1P59025 263 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 MMEL1Q495T6 779 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 KCNT2Q6UVM3 1135 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 C12orf65Q9H3J6 166 aaKnown RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ITGA11Q9UKX5 1188 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ARL2BPQ9Y2Y0 163 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 CCDC88AQ3V6T2 1871 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 COL4A1P02462 1669 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 CES2O00748 559 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 PYGBP11216 843 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ATXN3P54252 364 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 WNT7BP56706 349 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ZNF268Q14587 947 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 FASTKD1Q53R41 847 aaKnown RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 UNC45BQ8IWX7 931 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 DTX3LQ8TDB6 740 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 TSSK1BQ9BXA7 367 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ELOVL4Q9GZR5 314 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 GPBP1L1Q9HC44 474 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 MYO7AQ13402 2215 aa15.14■□□□□ 0.01
RETREG3-208ENST00000589797 DNALI1O14645 258 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ZFXP17010 805 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 ARID3BQ8IVW6 561 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 TFB1MQ8WVM0 346 aaKnown RBP15.14■□□□□ 0.01
RETREG3-208ENST00000589797 TMEM191CA6NGB0 347 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 SIGLEC16A6NMB1 481 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 KBTBD13C9JR72 458 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 FSCN2O14926 492 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 HAUS5O94927 633 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 ERBB2P04626 1255 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 MAP2K2P36507 400 aa15.13■□□□□ 0.01
RETREG3-208ENST00000589797 MCL1Q07820 350 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms