RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 KRBA1A5PL33 1030 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 M0QYV0 167 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 OLFM2O95897 454 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 MBL2P11226 248 aaPredicted RBP16.1■□□□□ 0.17
MBD1-219ENST00000589733 TCF3P15923 654 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 CDK11BP21127 795 aaKnown RBP16.1■□□□□ 0.17
MBD1-219ENST00000589733 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
MBD1-219ENST00000589733 USP8P40818 1118 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 PSEN1P49768 467 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 KIF11P52732 1056 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 MTF1Q14872 753 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 SLC44A4Q53GD3 710 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 SNX30Q5VWJ9 437 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 C1orf228Q6PIY5 440 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 CCDC186Q7Z3E2 898 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 TADA2BQ86TJ2 420 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 PIGZQ86VD9 579 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 TTC30AQ86WT1 665 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 MSANTD3Q96H12 275 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 VPS16Q9H269 839 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 TBC1D17Q9HA65 648 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 CCL26Q9Y258 94 aa16.1■□□□□ 0.17
MBD1-219ENST00000589733 SYCE3A1L190 88 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 CYP26A1O43174 497 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 PDGFBP01127 241 aaPredicted RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 ZDHHC11BP0C7U3 371 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 GNA15P30679 374 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 CLCN5P51795 746 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 SLC7A9P82251 487 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 PDE4CQ08493 712 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 ZNF77Q15935 545 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 CNGA2Q16280 664 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 ASTLQ6HA08 431 aaPredicted RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 GJB7Q6PEY0 223 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 TPRG1Q6ZUI0 275 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 SIX6OS1Q8N1H7 587 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 ARHGAP18Q8N392 663 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 TTC16Q8NEE8 873 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 SHC3Q92529 594 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 CYP2S1Q96SQ9 504 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 CDK5RAP1Q96SZ6 601 aaKnown RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 SIX2Q9NPC8 291 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 LIMA1Q9UHB6 759 aaKnown RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 CHORDC1Q9UHD1 332 aaPredicted RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 DNAJC12Q9UKB3 198 aa16.09■□□□□ 0.17
MBD1-219ENST00000589733 MRPS17Q9Y2R5 130 aaKnown RBP16.09■□□□□ 0.17
MBD1-219ENST00000589733 BECN2A8MW95 431 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
MBD1-219ENST00000589733 MAN2B1O00754 1011 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 THAP12O43422 761 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 TLR5O60602 858 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 RALAP11233 206 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 GLULP15104 373 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 IFNAR2P48551 515 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 ZNF165P49910 485 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
MBD1-219ENST00000589733 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
MBD1-219ENST00000589733 STARD6P59095 220 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 TPM4P67936 248 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 APBA1Q02410 837 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 NCAPHQ15003 741 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 PDGFRLQ15198 375 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 MEA1Q16626 185 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 RAB41Q5JT25 222 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 CWF19L1Q69YN2 538 aaKnown RBP16.08■□□□□ 0.16
MBD1-219ENST00000589733 KIAA1958Q8N8K9 716 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 UBA3Q8TBC4 463 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 SH3RF2Q8TEC5 729 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 TFAP2BQ92481 460 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 C8orf33Q9H7E9 229 aaPredicted RBP16.08■□□□□ 0.16
MBD1-219ENST00000589733 NAGPAQ9UK23 515 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 CPQQ9Y646 472 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 USP3Q9Y6I4 520 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
MBD1-219ENST00000589733 KANSL1LA0AUZ9 987 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 LGALS16A8MUM7 142 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 LEFTY2O00292 366 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 ARNTLO00327 626 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 COCHO43405 550 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 CAVIN2O95810 425 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 ZNF18P17022 549 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 AOC1P19801 751 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 TKTL1P51854 596 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 MLLT6P55198 1093 aaPredicted RBP16.07■□□□□ 0.16
MBD1-219ENST00000589733 PTK2Q05397 1052 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 ITPRIPL2Q3MIP1 535 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 ZNF852Q6ZMS4 543 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 KCTD13Q8WZ19 329 aa16.07■□□□□ 0.16
MBD1-219ENST00000589733 SECISBP2LQ93073 1101 aaKnown RBP16.07■□□□□ 0.16
MBD1-219ENST00000589733 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms