RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 TCF3P15923 654 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 ACO1P21399 889 aaKnown RBP24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 CTHP32929 405 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 MTIF2P46199 727 aaKnown RBP24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 SGO2Q562F6 1265 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 HECTD3Q5T447 861 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 C1orf228Q6PIY5 440 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 TMEM270Q6UE05 265 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 RRAGAQ7L523 313 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 THAP9Q9H5L6 903 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 SMPD4Q9NXE4 827 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 PCDHB4Q9Y5E5 795 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 WDFY4Q6ZS81 3184 aa24.81■■□□□ 1.56
CHAF1A-205ENST00000587580 LEFTY2O00292 366 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 CYP26A1O43174 497 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 ZDHHC11BP0C7U3 371 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 ARSAP15289 507 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 IFNAR2P48551 515 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 ZXDBP98169 803 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 GCNT1Q02742 428 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 RUNX3Q13761 415 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 PDGFRLQ15198 375 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 GOLGA7BQ2TAP0 167 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 SNX30Q5VWJ9 437 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 RALGPS2Q86X27 583 aaPredicted RBP24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 FAM114A1Q8IWE2 563 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 OSCP1Q8WVF1 389 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 IRF2BPLQ9H1B7 796 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 TLR8Q9NR97 1041 aaKnown RBP24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 DUS2Q9NX74 493 aaKnown RBP24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 TSPAN16Q9UKR8 245 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 SCML2Q9UQR0 700 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 WNT6Q9Y6F9 365 aa24.8■■□□□ 1.56
CHAF1A-205ENST00000587580 COCHO43405 550 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 MBD3O95983 291 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 MAGEA9P43362 315 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 TUBP50607 506 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 ANGPT1Q15389 498 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 TXNDC11Q6PKC3 985 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 RBM43Q6ZSC3 357 aaKnown RBP24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 ANKRD52Q8NB46 1076 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 CLDN23Q96B33 292 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 CCSER2Q9H7U1 834 aa24.79■■□□□ 1.56
CHAF1A-205ENST00000587580 VDRP11473 427 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 PGFP49763 221 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 KIF11P52732 1056 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 SLC8A3P57103 927 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 TTC30AQ86WT1 665 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 ZNF687Q8N1G0 1237 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 ATOH1Q92858 354 aaPredicted RBP24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 CRACR2AQ9BSW2 395 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 FAM86C1Q9NVL1 165 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 HESX1Q9UBX0 185 aa24.78■■□□□ 1.56
CHAF1A-205ENST00000587580 OTOL1A6NHN0 477 aaPredicted RBP24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 PAEPP09466 180 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 RPS9P46781 194 aaKnown RBP24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 BCAT1P54687 386 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 FZD5Q13467 585 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 EML3Q32P44 896 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 HSP90AA4PQ58FG1 418 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 CT47A1Q5JQC4 288 aaPredicted RBP24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 PIGZQ86VD9 579 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 DDX42Q86XP3 938 aaKnown RBP eCLIP24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 C1orf210Q8IVY1 113 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 CPA6Q8N4T0 437 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 RBBP8NLQ8NC74 664 aaPredicted RBP24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 ATP2A3Q93084 1043 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 KREMEN1Q96MU8 473 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 NACA2Q9H009 215 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 CFAP97Q9P2B7 532 aa24.77■■□□□ 1.56
CHAF1A-205ENST00000587580 O00370 1275 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 TLR5O60602 858 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 BST2Q10589 180 aaKnown RBP24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 PON2Q15165 354 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 MAN2A1Q16706 1144 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 TRIM65Q6PJ69 517 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 GBP6Q6ZN66 633 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 CCDC186Q7Z3E2 898 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 UBXN6Q9BZV1 441 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 ECT2Q9H8V3 914 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 SPATA6Q9NWH7 488 aaPredicted RBP24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 KIAA1257Q9ULG3 409 aa24.76■■□□□ 1.55
CHAF1A-205ENST00000587580 A0A1W2PQH9 124 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 RNF225M0QZC1 329 aaPredicted RBP24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 PDE4CQ08493 712 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 TFAP2BQ92481 460 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 ZFRQ96KR1 1074 aaKnown RBP24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 LINC00597Q9H2U6 94 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 LMAN1LQ9HAT1 526 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 NMUR1Q9HB89 426 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 UBE2TQ9NPD8 197 aaPredicted RBP24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 OSER1Q9NX31 292 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 USP3Q9Y6I4 520 aa24.75■■□□□ 1.55
CHAF1A-205ENST00000587580 CACNA1HO95180 2353 aa24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 TULP2O00295 520 aa24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 SCAMP3O14828 347 aaKnown RBP24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 XPO1O14980 1071 aaKnown RBP24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 CHRNB1P11230 501 aa24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 PRKCSHP14314 528 aaPredicted RBP24.74■■□□□ 1.55
CHAF1A-205ENST00000587580 SLC9A1P19634 815 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms