RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 PREPLQ4J6C6 727 aaPredicted RBP8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 EOGTQ5NDL2 527 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 UNC13DQ70J99 1090 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 LPCAT2Q7L5N7 544 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 C12orf56Q8IXR9 622 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ALLCQ8N6M5 410 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 SCFD1Q8WVM8 642 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ZNF516Q92618 1163 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 CCDC127Q96BQ5 260 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 B3GNT5Q9BYG0 378 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ZNF518BQ9C0D4 1074 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 XYLT2Q9H1B5 865 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 DPEP3Q9H4B8 488 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 MAGEF1Q9HAY2 307 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ARHGEF4Q9NR80 690 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 COMMD8Q9NX08 183 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 WASF3Q9UPY6 502 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ATP8B3O60423 1300 aa8.53□□□□□ -1.04
CAPNS1-203ENST00000586963 ZZEF1O43149 2961 aa8.52□□□□□ -1.04
CAPNS1-203ENST00000586963 ASPMQ8IZT6 3477 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 EML5Q05BV3 1969 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 FAM92AA1XBS5 289 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SGK1O00141 431 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 CLDN5O00501 218 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 GIPC1O14908 333 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 HOXC11O43248 304 aaPredicted RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 COCHO43405 550 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 CUTAO60888 179 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ADAM23O75077 832 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 YEATS4O95619 227 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ZDHHC11BP0C7U3 371 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 HOXD12P35452 270 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 DHPSP49366 369 aaPredicted RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 CYP2J2P51589 502 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 AP3M2P53677 418 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 MYL6P60660 151 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 CLDN10P78369 228 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 LMAN2Q12907 356 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 BMT2Q1RMZ1 405 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 LY6G5CQ5SRR4 150 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 HECTD3Q5T447 861 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SH3PXD2AQ5TCZ1 1133 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 EMC10Q5UCC4 262 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 BTBD8Q5XKL5 378 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SHC4Q6S5L8 630 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 NUDT18Q6ZVK8 323 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 PAQR9Q6ZVX9 377 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 C12orf40Q86WS4 652 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SYT12Q8IV01 421 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SFTPA1Q8IWL2 248 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 NELFCDQ8IXH7 590 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ABCA7Q8IZY2 2146 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 TMEM174Q8WUU8 243 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 PIGKQ92643 395 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 FBXO32Q969P5 355 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 DHX58Q96C10 678 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 TNIP3Q96KP6 325 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 TFIP11Q9UBB9 837 aaKnown RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 CHORDC1Q9UHD1 332 aaPredicted RBP8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
CAPNS1-203ENST00000586963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 TBC1D3BA6NDS4 549 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 PATE3B3GLJ2 98 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 MAP3K13O43283 966 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 EXOC3O60645 756 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 PHACTR2O75167 634 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 SLC5A3P53794 718 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 KNOP1Q1ED39 458 aaKnown RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 TRIM61Q5EBN2 209 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 SLC23A3Q6PIS1 610 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 FAM35AQ86V20 835 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 TTC30AQ86WT1 665 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 TMEFF1Q8IYR6 380 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 KDF1Q8NAX2 398 aaPredicted RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 SCAMP5Q8TAC9 235 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 GOLGA5Q8TBA6 731 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 PARD3BQ8TEW8 1205 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 RLN3Q8WXF3 142 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 SMARCD1Q96GM5 515 aa8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
CAPNS1-203ENST00000586963 CSNK1G1Q9HCP0 422 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms