RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SCAMP3O14828 347 aaKnown RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 CLIC2O15247 247 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 COCHO43405 550 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 PPP6R2O75170 966 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 RTN3O95197 1032 aaPredicted RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 APODP05090 189 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 MBL2P11226 248 aaPredicted RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 ATICP31939 592 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 DHPSP49366 369 aaPredicted RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 MAP7D1Q3KQU3 841 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 LY6G5CQ5SRR4 150 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 LPCAT2Q7L5N7 544 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 ETFBKMTQ8IXQ9 262 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 XXYLT1Q8NBI6 393 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 PDZD8Q8NEN9 1154 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 KCNV2Q8TDN2 545 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 PIGKQ92643 395 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 VRTNQ9H8Y1 702 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 POLMQ9NP87 494 aaPredicted RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 ARHGEF4Q9NR80 690 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 ANAPC1Q9H1A4 1944 aa15.38■□□□□ 0.05
SDF2-202ENST00000585428 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
SDF2-202ENST00000585428 SPAG17Q6Q759 2223 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 MAP1BP46821 2468 aaKnown RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 FAM92AA1XBS5 289 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 C1QTNF9BB2RNN3 333 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 SPTLC2O15270 562 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 ADH1CP00326 375 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 ZDHHC11BP0C7U3 371 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 C1QTNF9P0C862 333 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 ADH5P11766 374 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 PTGER3P43115 390 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 CDH8P55286 799 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 TNNC1P63316 161 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 CLDN10P78369 228 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 GAD2Q05329 585 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 EOGTQ5NDL2 527 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 FAM26FQ5R3K3 315 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 SYT12Q8IV01 421 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 C12orf56Q8IXR9 622 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 TMEFF1Q8IYR6 380 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 IQUBQ8NA54 791 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 KDF1Q8NAX2 398 aaPredicted RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 WHAMMQ8TF30 809 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 TMEM121BQ9BXQ6 578 aaPredicted RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 COMMD8Q9NX08 183 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 NXF1Q9UBU9 619 aaKnown RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 HCN2Q9UL51 889 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 CNOT1A5YKK6 2376 aaKnown RBP15.37■□□□□ 0.05
SDF2-202ENST00000585428 ABCA7Q8IZY2 2146 aa15.37■□□□□ 0.05
SDF2-202ENST00000585428 USP24Q9UPU5 2620 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.36■□□□□ 0.05
SDF2-202ENST00000585428 MAP3K13O43283 966 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 STX6O43752 255 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 TOP3BO95985 862 aaKnown RBP15.36■□□□□ 0.05
SDF2-202ENST00000585428 TUBP50607 506 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 CYP2J2P51589 502 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 ASIC1P78348 528 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 ZNF252P-AS1Q0IIN9 211 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 LMAN2Q12907 356 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 TRPC3Q13507 836 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 BYSLQ13895 437 aaKnown RBP15.36■□□□□ 0.05
SDF2-202ENST00000585428 HECTD3Q5T447 861 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 SLC23A3Q6PIS1 610 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 SHC4Q6S5L8 630 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 TTC30AQ86WT1 665 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 TMEM25Q86YD3 366 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 PLEKHO2Q8TD55 490 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 FBXO32Q969P5 355 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 WBP2Q969T9 261 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 SYAP1Q96A49 352 aaPredicted RBP15.36■□□□□ 0.05
SDF2-202ENST00000585428 DHX58Q96C10 678 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
SDF2-202ENST00000585428 PILRBQ9UKJ0 227 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 STARD13Q9Y3M8 1113 aa15.36■□□□□ 0.05
SDF2-202ENST00000585428 TBC1D3BA6NDS4 549 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 HOXC11O43248 304 aaPredicted RBP15.35■□□□□ 0.05
SDF2-202ENST00000585428 GREM1O60565 184 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 TULP3O75386 442 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 C4BPAP04003 597 aaKnown RBP15.35■□□□□ 0.05
SDF2-202ENST00000585428 PGFP49763 221 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
SDF2-202ENST00000585428 STK38Q15208 465 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 BMT2Q1RMZ1 405 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 TRIM61Q5EBN2 209 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 PEAR1Q5VY43 1037 aaPredicted RBP15.35■□□□□ 0.05
SDF2-202ENST00000585428 UNQ6494/PRO21346Q6UXR6 183 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 UNC13DQ70J99 1090 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 NAT16Q8N8M0 369 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 HMGB4Q8WW32 186 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 NUSAP1Q9BXS6 441 aaKnown RBP15.35■□□□□ 0.05
SDF2-202ENST00000585428 CCSER2Q9H7U1 834 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 ZDHHC4Q9NPG8 344 aa15.35■□□□□ 0.05
SDF2-202ENST00000585428 SPHK2Q9NRA0 654 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms