RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CD101Q93033 1021 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 TMX3Q96JJ7 454 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ZC3H10Q96K80 434 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 CYP2S1Q96SQ9 504 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 PKMYT1Q99640 499 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 FAM213AQ9BRX8 229 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 EDEM2Q9BV94 578 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 LSM14BQ9BX40 385 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 KLF16Q9BXK1 252 aaPredicted RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 TPSD1Q9BZJ3 242 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ST6GALNAC4Q9H4F1 302 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 VPS45Q9NRW7 570 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 DUS2Q9NX74 493 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 DDX43Q9NXZ2 648 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 TBC1D7Q9P0N9 293 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 GTF3C4Q9UKN8 822 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 AGAP1Q9UPQ3 857 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 PLXND1Q9Y4D7 1925 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 LAMA1P25391 3075 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 TRAV19A0A0A6YYK7 116 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 GOLGA8IPA6NC78 632 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 GOLGA8JA6NMD2 632 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 NDUFB5O43674 189 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 IL18RAPO95256 599 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 APBB3O95704 486 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 CKMP06732 381 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 KRT19P08727 400 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 GBP1P32455 592 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 LONP1P36776 959 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 PNPLA4P41247 253 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 DGKEP52429 567 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 SHC2P98077 582 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 DAB2P98082 770 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 MYL7Q01449 175 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 RABEP1Q15276 862 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ELF2Q15723 593 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 FBXO43Q4G163 708 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 USP49Q70CQ1 688 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 SYT13Q7L8C5 426 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF720Q7Z2F6 126 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 BRSK2Q8IWQ3 736 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 SCN4BQ8IWT1 228 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ARL14EPQ8N8R7 260 aaPredicted RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 NOC3LQ8WTT2 800 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ATP2A3Q93084 1043 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ACDQ96AP0 544 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 HVCN1Q96D96 273 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 TRMT2BQ96GJ1 504 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 ACBD6Q9BR61 282 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 TMEM206Q9H813 350 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 RBAKQ9NYW8 714 aaPredicted RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 UXTQ9UBK9 157 aaPredicted RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 INVSQ9Y283 1065 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 TMA7Q9Y2S6 64 aaKnown RBP8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 SNX9Q9Y5X1 595 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 MYH10P35580 1976 aa8.35□□□□□ -1.07
SMCHD1-210ENST00000583800 GON4LQ3T8J9 2241 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 LNP1A1A4G5 178 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 BCLAF3A2AJT9 711 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 MYMKA6NI61 221 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 C4orf47A7E2U8 309 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 GIPC1O14908 333 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 HUS1O60921 280 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 RHOBTB1O94844 696 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 GCNT3O95395 438 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CAVIN2O95810 425 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 BMP15O95972 392 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 BCKDHBP21953 392 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 DDIT3P35638 169 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 NOVA1P51513 510 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CASP5P51878 434 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 PSMC1P62191 440 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 KCNB1Q14721 858 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 POSTNQ15063 836 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 L1TD1Q5T7N2 865 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 PMS2CLQ68D20 193 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 LMBRD2Q68DH5 695 aaPredicted RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 ADGRF2Q8IZF7 708 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 TMEM86AQ8N2M4 240 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 LRRC52Q8N7C0 313 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 TSTD1Q8NFU3 115 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CXorf38Q8TB03 319 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 EXOC4Q96A65 974 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 EPSTI1Q96J88 318 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 MYRFLQ96LU7 910 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CBWD1Q9BRT8 395 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 STRA6Q9BX79 667 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 FGFBP2Q9BYJ0 223 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms