RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 HNRNPLLQ8WVV9 542 aaKnown RBP13.12□□□□□ -0.31
TOP3A-215ENST00000583328 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
TOP3A-215ENST00000583328 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 ACCSQ96QU6 501 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 CRTAC1Q9NQ79 661 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 ANK1P16157 1881 aa13.12□□□□□ -0.31
TOP3A-215ENST00000583328 IGHV1OR15-9A0A0B4J2B8 117 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
TOP3A-215ENST00000583328 ZNF217O75362 1048 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 OLFM2O95897 454 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 HOXB2P14652 356 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 DDIT3P35638 169 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 WASP42768 502 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 KCNA1Q09470 495 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 TAF10Q12962 218 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 CCNI2Q6ZMN8 369 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-215ENST00000583328 DYMQ7RTS9 669 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 ANKRD36BP1Q96IX9 119 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 MRPL44Q9H9J2 332 aaKnown RBP13.11□□□□□ -0.31
TOP3A-215ENST00000583328 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 SIX4Q9UIU6 781 aa13.11□□□□□ -0.31
TOP3A-215ENST00000583328 PI4KAP42356 2102 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 A0A1W2PQD8 194 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 F8VP50 259 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 H3BQV1 296 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 GARTP22102 1010 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 NTSR1P30989 418 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 BECN1Q14457 450 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 PLEKHG6Q3KR16 790 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SLC41A1Q8IVJ1 513 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SYCP3Q8IZU3 236 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 KBTBD7Q8WVZ9 684 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 PCED1BQ96HM7 432 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 C8orf48Q96LL4 319 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 TBC1D7Q9P0N9 293 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SUSD2Q9UGT4 822 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 CYP8B1Q9UNU6 501 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
TOP3A-215ENST00000583328 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
TOP3A-215ENST00000583328 OBSL1O75147 1896 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 NDUFS2O75306 463 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 TULP3O75386 442 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 PPP1R37O75864 691 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 GCNT3O95395 438 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 TNNC2P02585 160 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
TOP3A-215ENST00000583328 GNSP15586 552 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 WARSP23381 471 aaKnown RBP13.09□□□□□ -0.31
TOP3A-215ENST00000583328 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
TOP3A-215ENST00000583328 ANO4Q32M45 955 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 MDH1BQ5I0G3 518 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 NAXDQ8IW45 347 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 ETFBKMTQ8IXQ9 262 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 MDM1Q8TC05 714 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 TCHHQ07283 1943 aa13.09□□□□□ -0.31
TOP3A-215ENST00000583328 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-215ENST00000583328 GJB3O75712 270 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 PDCP20941 246 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 YWHAQP27348 245 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 GNL1P36915 607 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-215ENST00000583328 GRIN1Q05586 938 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 TERB1Q8NA31 727 aa13.08□□□□□ -0.32
TOP3A-215ENST00000583328 OR6B3Q8NGW1 331 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms