RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ABL1P00519 1130 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 ADH5P11766 374 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 ENGP17813 658 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 GRIA2P42262 883 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 DPP6P42658 865 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 TNFRSF4P43489 277 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 TAF10Q12962 218 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 BYSLQ13895 437 aaKnown RBP14.44□□□□□ -0.1
SS18-222ENST00000582792 MAP7D1Q3KQU3 841 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 MDH1BQ5I0G3 518 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 EMC10Q5UCC4 262 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 TDRD10Q5VZ19 366 aaKnown RBP14.44□□□□□ -0.1
SS18-222ENST00000582792 FAM173BQ6P4H8 233 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 SLC23A3Q6PIS1 610 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 CCDC73Q6ZRK6 1079 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 ARMCX6Q7L4S7 300 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 HS2ST1Q7LGA3 356 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 CBWD2Q8IUF1 395 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 WDR49Q8IV35 697 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 FRMD1Q8N878 549 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 LINC00301Q8NCQ3 95 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 MRPL45Q9BRJ2 306 aaKnown RBP14.44□□□□□ -0.1
SS18-222ENST00000582792 SNX25Q9H3E2 840 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 SLC32A1Q9H598 525 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 TBC1D14Q9P2M4 693 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 NME7Q9Y5B8 376 aa14.44□□□□□ -0.1
SS18-222ENST00000582792 ADAM23O75077 832 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 PPP6R2O75170 966 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 TACC1O75410 805 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 MBL2P11226 248 aaPredicted RBP14.43□□□□□ -0.1
SS18-222ENST00000582792 HOXD12P35452 270 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 GNL1P36915 607 aaPredicted RBP14.43□□□□□ -0.1
SS18-222ENST00000582792 STAT6P42226 847 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 MAPK8P45983 427 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 CACNA2D1P54289 1103 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 KDSRQ06136 332 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 PEAR1Q5VY43 1037 aaPredicted RBP14.43□□□□□ -0.1
SS18-222ENST00000582792 LYSMD4Q5XG99 296 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 TRAPPC11Q7Z392 1133 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 PHTF2Q8N3S3 785 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 HMGB4Q8WW32 186 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
SS18-222ENST00000582792 ELOVL4Q9GZR5 314 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 KIAA1586Q9HCI6 787 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 TMEM30AQ9NV96 361 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 PILRBQ9UKJ0 227 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 NEUROG3Q9Y4Z2 214 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 MYOFQ9NZM1 2061 aa14.43□□□□□ -0.1
SS18-222ENST00000582792 A0A087X0B3 334 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 TCRBV21S2A2A0A5A6 115 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 E2F8A0AVK6 867 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 UPK3BL1B0FP48 263 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 UPK3BL2E5RIL1 263 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 CST3P01034 146 aaPredicted RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 GAD2Q05329 585 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 SEMA3BQ13214 749 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 STK38Q15208 465 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 LY6G5CQ5SRR4 150 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 FOXD4L5Q5VV16 416 aaPredicted RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 KIAA1211LQ6NV74 962 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 STXBP4Q6ZWJ1 553 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 PIP4P1Q86T03 277 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 ETFBKMTQ8IXQ9 262 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 CCDC65Q8IXS2 484 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 PGBD3Q8N328 593 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 GLIS3Q8NEA6 775 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 PDZD8Q8NEN9 1154 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 OR6B3Q8NGW1 331 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 FOXD4L4Q8WXT5 416 aaPredicted RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 OVCA2Q8WZ82 227 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 OTUB2Q96DC9 234 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 ZFRQ96KR1 1074 aaKnown RBP14.42□□□□□ -0.1
SS18-222ENST00000582792 PANK2Q9BZ23 570 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 ZNF518BQ9C0D4 1074 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 DPEP3Q9H4B8 488 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 ZDHHC4Q9NPG8 344 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 HSPBP1Q9NZL4 362 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 PI4KAP42356 2102 aa14.42□□□□□ -0.1
SS18-222ENST00000582792 ATXN2Q99700 1313 aaKnown RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 ANKRD11Q6UB99 2663 aaPredicted RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 PCNX2A6NKB5 2137 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 GON4LQ3T8J9 2241 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 AP5Z1O43299 807 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 COCHO43405 550 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 HYAL3O43820 417 aaPredicted RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 ITPKAP23677 461 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 YWHAQP27348 245 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 HOXD13P35453 343 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 CEBPZQ03701 1054 aaKnown RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 IFRD2Q12894 506 aaPredicted RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 DUOXA1Q1HG43 343 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 NUP93Q8N1F7 819 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 CEP76Q8TAP6 659 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 KCNV2Q8TDN2 545 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 ZCCHC14Q8WYQ9 949 aaKnown RBP14.41□□□□□ -0.1
SS18-222ENST00000582792 DUSP9Q99956 384 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms