RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CENPTQ96BT3 561 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ASB14A6NK59 587 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CXorf49A8MYA2 514 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CDH16O75309 829 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RNF8O76064 485 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 IL18RAPO95256 599 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ITGAVP06756 1048 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NUMBP49757 651 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NDUFV1P49821 464 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 BMPR2Q13873 1038 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KRT81Q14533 505 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 E2F5Q15329 346 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OLFML2BQ68BL8 750 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OLFML1Q6UWY5 402 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 BBS12Q6ZW61 710 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRPM8Q7Z2W7 1104 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCDC63Q8NA47 563 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PCDH19Q8TAB3 1148 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KCNN1Q92952 543 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TMEM237Q96Q45 408 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SNRNP25Q9BV90 132 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RHOBTB2Q9BYZ6 727 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LHX5Q9H2C1 402 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZNF395Q9H8N7 513 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HOMER3Q9NSC5 361 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PIN4Q9Y237 131 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 A6NNZ2 444 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MED7O43513 233 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OAS1P00973 400 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CA4P22748 312 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CETN2P41208 172 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HDAC4P56524 1084 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TUBB8Q3ZCM7 444 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LDLRAD1Q5T700 205 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PLD5Q8N7P1 536 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TBC1D31Q96DN5 1066 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PRR11Q96HE9 360 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PAFAH2Q99487 392 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NT5C1AQ9BXI3 368 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZNF518BQ9C0D4 1074 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ADAMTS10Q9H324 1103 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 A8MXQ7 604 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GPR32O75388 356 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MNAT1P51948 309 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZNF143P52747 638 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NUBP1P53384 320 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HADHQ16836 314 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MPHOSPH6Q99547 160 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DHX35Q9H5Z1 703 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PLAC1Q9HBJ0 212 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GBA2Q9HCG7 927 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DDX56Q9NY93 547 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LGALS13Q9UHV8 139 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 STRIP2Q9ULQ0 834 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 STK38LQ9Y2H1 464 aa11.16□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MYADML2A6NDP7 307 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 I3L4J1 428 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ALOX15BO15296 676 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GAS2O43903 313 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 VDRP11473 427 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RBP5P82980 135 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ROR1Q01973 937 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MORF4L2Q15014 288 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SURF1Q15526 300 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KBTBD12Q3ZCT8 623 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CENPUQ71F23 418 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SPATA21Q7Z572 469 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAM131BQ86XD5 332 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CMASQ8NFW8 434 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SLC2A14Q8TDB8 520 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LPPQ93052 612 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MECRQ9BV79 373 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PCDH18Q9HCL0 1135 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms