RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MIIPQ5JXC2 388 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 C19orf48Q6RUI8 117 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DPH6Q7L8W6 267 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 C11orf74Q86VG3 221 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CNGA4Q8IV77 575 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TCEAL8Q8IYN2 117 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NEK11Q8NG66 645 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ADAM32Q8TC27 787 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 BBC3Q96PG8 261 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 VPS16Q9H269 839 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PDE11AQ9HCR9 933 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DPP3Q9NY33 737 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CACNA2D2Q9NY47 1150 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 IFNKQ9P0W0 207 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 INSL5Q9Y5Q6 135 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ADAMTS9Q9P2N4 1935 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PLXNB3Q9ULL4 1909 aa9.31□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PTGESO14684 152 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MOSPD3O75425 235 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TNFSF9P41273 254 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PIK3CAP42336 1068 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MFAP3P55082 362 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 OSTNP61366 133 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GCNT1Q02742 428 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NCOA4Q13772 614 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NAB2Q15742 525 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 JADE1Q6IE81 842 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PKN3Q6P5Z2 889 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 APTXQ7Z2E3 356 aaKnown RBP9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EHBP1Q8NDI1 1231 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EEF2KMTQ96G04 330 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NT5C1BQ96P26 610 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PPP1R10Q96QC0 940 aaKnown RBP9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CYP3A43Q9HB55 503 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CYP4F11Q9HBI6 524 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ASAH2Q9NR71 780 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TAB2Q9NYJ8 693 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GCNT4Q9P109 453 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 APEX2Q9UBZ4 518 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DSEQ9UL01 958 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PTPRBP23467 1997 aa9.3□□□□□ -0.92
PDLIM1P3-201ENST00000582370 B3GAT3O94766 335 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ADCY5O95622 1261 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ASS1P00966 412 aaKnown RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TKTP29401 623 aaKnown RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GCLMP48507 274 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF75DP51815 510 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 BPIFB4P59827 614 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SIM1P81133 766 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PPP3CAQ08209 521 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CCDC173Q0VFZ6 552 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 LMAN2Q12907 356 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TEAD2Q15562 447 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 UAP1L1Q3KQV9 507 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TPGS2Q68CL5 300 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PMS2CLQ68D20 193 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TRIM65Q6PJ69 517 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CDR2LQ86X02 465 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 VSTM4Q8IW00 320 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CEP120Q8N960 986 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SYN2Q92777 582 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 RSPRY1Q96DX4 576 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF512Q96ME7 567 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TMEM209Q96SK2 561 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 OBP2AQ9NY56 170 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GTSE1Q9NYZ3 720 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CEP72Q9P209 647 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 EVLQ9UI08 416 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 BZW2Q9Y6E2 419 aaKnown RBP9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
PDLIM1P3-201ENST00000582370 APC2O95996 2303 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 KALRNO60229 2985 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 OBSL1O75147 1896 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ANO9A1A5B4 782 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 UPK3BL1B0FP48 263 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 UPK3BL2E5RIL1 263 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PIRO00625 290 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NFICP08651 508 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 MYL4P12829 197 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PON1P27169 355 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ANXA13P27216 316 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GBP1P32455 592 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PBX1P40424 430 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TAF6P49848 677 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TNNC1P63316 161 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 DLG4P78352 724 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 C19orf57Q0VDD7 668 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SCAPQ12770 1279 aa9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 GRSF1Q12849 480 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms