RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 F8W810 466 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 MYO1FO00160 1098 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 KCNK3O14649 394 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 CTIFO43310 598 aaKnown RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 CTAGE8P0CG41 777 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 COMTP21964 271 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 ACAT1P24752 427 aaKnown RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 KLRC2P26717 231 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 ADORA2BP29275 332 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 BRCC3P46736 316 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 LHX1P48742 406 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 GLUD2P49448 558 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 ZXDAP98168 799 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 DSG1Q02413 1049 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 PDCLQ13371 301 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 DCLRE1AQ6PJP8 1040 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 HFE2Q6ZVN8 426 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 BMP8AQ7Z5Y6 402 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 CTAGE6Q86UF2 777 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 C12orf76Q8N812 135 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 FEZF2Q8TBJ5 459 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 C18orf8Q96DM3 657 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 HES6Q96HZ4 224 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 SFXN1Q9H9B4 322 aa13.24□□□□□ -0.29
SRSF1-204ENST00000581979 TIMM13Q9Y5L4 95 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-204ENST00000581979 ARHGEF37A1IGU5 675 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 EFCAB8A8MWE9 144 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 I3L4J1 428 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 GABRDO14764 452 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 SPOPO43791 374 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 C1RP00736 705 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 CCDC130P13994 396 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 AARSP49588 968 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRSF1-204ENST00000581979 PSMC1P62191 440 aaKnown RBP13.23□□□□□ -0.29
SRSF1-204ENST00000581979 ATAT1Q5SQI0 421 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 DCUN1D2Q6PH85 259 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 CREG2Q8IUH2 290 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 FAM122AQ96E09 287 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 PBKQ96KB5 322 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 MIS12Q9H081 205 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 ST7Q9NRC1 585 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 WDR35Q9P2L0 1181 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRSF1-204ENST00000581979 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-204ENST00000581979 ZNF318Q5VUA4 2279 aa13.23□□□□□ -0.29
SRSF1-204ENST00000581979 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 CES2O00748 559 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 C2CD2LO14523 706 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TEX28O15482 410 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TADA3O75528 432 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GJB6O95452 261 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 ERBB2P04626 1255 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 ADH1AP07327 375 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 FUT10Q6P4F1 479 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 CD300LGQ6UXG3 332 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GPR149Q86SP6 731 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GOLGA1Q92805 767 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 SYT15Q9BQS2 421 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GPR62Q9BZJ7 368 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 RNF14Q9UBS8 474 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 DSEQ9UL01 958 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 USTQ9Y2C2 406 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TCRBV5S1A1TA0A578 114 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 C2CD4DB7Z1M9 353 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 M0QZQ0 153 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 M0R296 226 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 DDX3YO15523 660 aaKnown RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 ATP2C2O75185 946 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 SLC1A1P43005 524 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GABRB2P47870 512 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 RGS7P49802 495 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 BCAT1P54687 386 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 SNX16P57768 344 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 PDE4CQ08493 712 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 BST2Q10589 180 aaKnown RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms