RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 FAM124BQ9H5Z6 455 aaPredicted RBP13.6□□□□□ -0.23
SS18-219ENST00000581570 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
SS18-219ENST00000581570 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
SS18-219ENST00000581570 PTPRDP23468 1912 aa13.6□□□□□ -0.23
SS18-219ENST00000581570 TRIM66O15016 1216 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 OAS1P00973 400 aaKnown RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 MBL2P11226 248 aaPredicted RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 NTSR1P30989 418 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 WASP42768 502 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 CYP27A1Q02318 531 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 MAPRE1Q15691 268 aaKnown RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 TDRD10Q5VZ19 366 aaKnown RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 TOGARAM2Q6ZUX3 1019 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 SLCO6A1Q86UG4 719 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 RAD54LQ92698 747 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 HVCN1Q96D96 273 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 ZNF419Q96HQ0 510 aaPredicted RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 FAM84AQ96KN4 292 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 CRTAC1Q9NQ79 661 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 RBAKQ9NYW8 714 aaPredicted RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 DEC1Q9P2X7 70 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 SUSD2Q9UGT4 822 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 CYP8B1Q9UNU6 501 aa13.59□□□□□ -0.23
SS18-219ENST00000581570 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 TNRC6BQ9UPQ9 1833 aaKnown RBP13.59□□□□□ -0.23
SS18-219ENST00000581570 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 A0A1W2PQF6 199 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 E2F8A0AVK6 867 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 NDUFS2O75306 463 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 TULP3O75386 442 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
SS18-219ENST00000581570 PDGFRBP09619 1106 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 GNSP15586 552 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 NOP14P78316 857 aaKnown RBP13.58□□□□□ -0.24
SS18-219ENST00000581570 TAF10Q12962 218 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 C10orf76Q5T2E6 689 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 GLRX5Q86SX6 157 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 ETFBKMTQ8IXQ9 262 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
SS18-219ENST00000581570 RASSF8Q8NHQ8 419 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 KBTBD7Q8WVZ9 684 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 SIX4Q9UIU6 781 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 HCN2Q9UL51 889 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 TCHHQ07283 1943 aa13.58□□□□□ -0.24
SS18-219ENST00000581570 PI4KAP42356 2102 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ADAMTS9Q9P2N4 1935 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 F8VP50 259 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 HOXC11O43248 304 aaPredicted RBP13.57□□□□□ -0.24
SS18-219ENST00000581570 CBFA2T3O75081 653 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 TMEM191BP0C7N4 346 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 NDUFV2P19404 249 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 MAOBP27338 520 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 GRIK2Q13002 908 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ANO4Q32M45 955 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 WDR45BQ5MNZ6 344 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 LIMS2Q7Z4I7 341 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 SFR1Q86XK3 245 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 MIB1Q86YT6 1006 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 TERB1Q8NA31 727 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 MYCBPAPQ8TBZ2 947 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 IPO4Q8TEX9 1081 aaKnown RBP13.57□□□□□ -0.24
SS18-219ENST00000581570 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
SS18-219ENST00000581570 FOXJ1Q92949 421 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ERLEC1Q96DZ1 483 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 PCED1BQ96HM7 432 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 SLITRK1Q96PX8 696 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ACCSQ96QU6 501 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ZDHHC5Q9C0B5 715 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 MTMR12Q9C0I1 747 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 KIAA1522Q9P206 1035 aaPredicted RBP13.57□□□□□ -0.24
SS18-219ENST00000581570 PCOLCE2Q9UKZ9 415 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 STARD13Q9Y3M8 1113 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 PCDH15Q96QU1 1955 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 LAMA5O15230 3695 aa13.57□□□□□ -0.24
SS18-219ENST00000581570 ANAPC1Q9H1A4 1944 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 LOC400499M0QZD8 3231 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 TRIM24O15164 1050 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 PPP1R37O75864 691 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 WARSP23381 471 aaKnown RBP13.56□□□□□ -0.24
SS18-219ENST00000581570 DDIT3P35638 169 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 KCNA1Q09470 495 aa13.56□□□□□ -0.24
SS18-219ENST00000581570 IFRD2Q12894 506 aaPredicted RBP13.56□□□□□ -0.24
SS18-219ENST00000581570 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms