RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NR2E1Q9Y466 385 aa16.35■□□□□ 0.21
SS18-216ENST00000580751 EPN1Q9Y6I3 576 aaPredicted RBP16.35■□□□□ 0.21
SS18-216ENST00000580751 ZFP37Q9Y6Q3 630 aaPredicted RBP16.35■□□□□ 0.21
SS18-216ENST00000580751 GREB1Q4ZG55 1949 aa16.35■□□□□ 0.21
SS18-216ENST00000580751 DOCK6Q96HP0 2047 aa16.35■□□□□ 0.21
SS18-216ENST00000580751 A0A1W2PRU2 124 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 FAM92AA1XBS5 289 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 CCR2P41597 374 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 GPD2P43304 727 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 PPP3CCP48454 512 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 KRT83P78385 493 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 IFRD2Q12894 506 aaPredicted RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 ARHGAP15Q53QZ3 475 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 TJAP1Q5JTD0 557 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 E4F1Q66K89 784 aaPredicted RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 DENND1BQ6P3S1 775 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 GAREM2Q75VX8 874 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 TDRD5Q8NAT2 981 aaKnown RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 SCAMP5Q8TAC9 235 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 SHKBP1Q8TBC3 707 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 KIAA1524Q8TCG1 905 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 STK32AQ8WU08 396 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 SLC35F5Q8WV83 523 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 KCTD13Q8WZ19 329 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 OVCA2Q8WZ82 227 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 FBXO32Q969P5 355 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 HSFY1Q96LI6 401 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 ZNF830Q96NB3 372 aaPredicted RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 NOX5Q96PH1 765 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 CHP1Q99653 195 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 LHX5Q9H2C1 402 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 ATXN3LQ9H3M9 355 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 IL37Q9NZH6 218 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 NOCTQ9UK39 431 aaKnown RBP16.34■□□□□ 0.21
SS18-216ENST00000580751 NCANO14594 1321 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 NOTCH4Q99466 2003 aa16.34■□□□□ 0.21
SS18-216ENST00000580751 NCOR1O75376 2440 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 ZSCAN12O43309 604 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 NDUFA10O95299 355 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 LSM8O95777 96 aaKnown RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 F11P03951 625 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 BMP1P13497 986 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 CEBPBP17676 345 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 DDX6P26196 483 aaKnown RBP eCLIP16.33■□□□□ 0.2
SS18-216ENST00000580751 GBP2P32456 591 aaPredicted RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 SSTR3P32745 418 aaPredicted RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 KIF11P52732 1056 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 CDR2Q01850 454 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 ARID5AQ03989 594 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 TAF10Q12962 218 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 SPA17Q15506 151 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 SLC18A3Q16572 532 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 RAB41Q5JT25 222 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 GPRIN1Q7Z2K8 1008 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 NOP9Q86U38 636 aaKnown RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 ADHFE1Q8IWW8 467 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 NPAS3Q8IXF0 933 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 DDX1Q92499 740 aaKnown RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 MRPS31Q92665 395 aaKnown RBP16.33■□□□□ 0.2
SS18-216ENST00000580751 FGF13Q92913 245 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 TCEAL4Q96EI5 215 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 GDE1Q9NZC3 331 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 CDH7Q9ULB5 785 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 TTC28Q96AY4 2481 aa16.33■□□□□ 0.2
SS18-216ENST00000580751 SOWAHDA6NJG2 315 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TULP2O00295 520 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 AKR1B10O60218 316 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 MOSPD3O75425 235 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 CCDC175P0C221 793 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
SS18-216ENST00000580751 TKTL1P51854 596 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TEAD2Q15562 447 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TAF3Q5VWG9 929 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 PMF1Q6P1K2 205 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 RAD9BQ6WBX8 426 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TRIM72Q6ZMU5 477 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 ZNF662Q6ZS27 426 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TMEM150AQ86TG1 271 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 ING5Q8WYH8 240 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 SLITRK6Q9H5Y7 841 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 SCML2Q9UQR0 700 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 USP3Q9Y6I4 520 aa16.32■□□□□ 0.2
SS18-216ENST00000580751 DOCK8Q8NF50 2099 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 ZNF638Q14966 1978 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms