RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CD101Q93033 1021 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 AVENQ9NQS1 362 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM114A2Q9NRY5 505 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KIAA1257Q9ULG3 409 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GOLGA6L10A6NI86 522 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PHF2O75151 1096 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CALB1P05937 261 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MYBL1P10243 752 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KCNJ1P48048 391 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LIG3P49916 1009 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PLTPP55058 493 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PPP2R5EQ16537 467 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZFYVE27Q5T4F4 411 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TAS1R1Q7RTX1 841 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CCDC50Q8IVM0 306 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MREGQ8N565 214 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 BCL7CQ8WUZ0 217 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ERP44Q9BS26 406 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM169AQ9Y6X4 670 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TTC3P53804 2025 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ODC1P11926 461 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KRT3P12035 628 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SYN1P17600 705 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NR1D1P20393 614 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NDUFV1P49821 464 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SLC13A5Q86YT5 568 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.3□□□□□ -0.284e-10■□□□□ 9.4
CDK5RAP3-217ENST00000580287 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TRIM11Q96F44 468 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FMO2Q99518 471 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ALDH2P05091 517 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CHRNA3P32297 505 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TAS2R40P59535 323 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ZNF844Q08AG5 666 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SNX1Q13596 522 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 DHX34Q14147 1143 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TXNRD3NBQ6F5E7 133 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TRNP1Q6NT89 227 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CNKSR3Q6P9H4 555 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NCAPGQ9BPX3 1015 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KLHL11Q9NVR0 708 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 H0YGN5 161 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 M0QZQ0 153 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 EBAG9O00559 213 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NDUFAB1O14561 156 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PAPSS1O43252 624 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LHX1P48742 406 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 FAM171A1Q5VUB5 890 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 ATP6V1G3Q96LB4 118 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MRPL47Q9HD33 250 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 PPANQ9NQ55 473 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 NFS1Q9Y697 457 aa13.29□□□□□ -0.28
CDK5RAP3-217ENST00000580287 GALTP07902 379 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 RARAP10276 462 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 BDNFP23560 247 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 CTNNA2P26232 953 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TMEM86AQ8N2M4 240 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 C3orf20Q8ND61 904 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 UROC1Q96N76 676 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 TDRD15B5MCY1 1934 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-217ENST00000580287 LSP1P33241 339 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms