RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ABL1P00519 1130 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 OAS1P00973 400 aaKnown RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 CYP17A1P05093 508 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 MBL2P11226 248 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 OPRD1P41143 372 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 AP3M2P53677 418 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 SEC13P55735 322 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 LMAN2Q12907 356 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 STK4Q13043 487 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 PSMD6Q15008 389 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 CRY1Q16526 586 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 N4BP2L1Q5TBK1 243 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 BTBD8Q5XKL5 378 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 FILIP1Q7Z7B0 1213 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 XXYLT1Q8NBI6 393 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 B3GALNT2Q8NCR0 500 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 KIAA0895Q8NCT3 520 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 GPT2Q8TD30 523 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 TNIP3Q96KP6 325 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 PNKPQ96T60 521 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 PTPRJQ12913 1337 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 E2F8A0AVK6 867 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 LNP1A1A4G5 178 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 A8MXQ7 604 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 ZBTB24O43167 697 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 HCRTO43612 131 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 PHACTR2O75167 634 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 ATP2C2O75185 946 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 PDGFRBP09619 1106 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 ADH5P11766 374 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 P4HA1P13674 534 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 LMO2P25791 158 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 YWHAQP27348 245 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 HOXD12P35452 270 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 TUBP50607 506 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 CYP24A1Q07973 514 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 WDR72Q3MJ13 1102 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 C2orf27AQ580R0 203 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 NAIF1Q69YI7 327 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 PSAPL1Q6NUJ1 521 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 LPCAT2Q7L5N7 544 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 RABEPKQ7Z6M1 372 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 SPATA20Q8TB22 786 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 EZH1Q92800 747 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 NUSAP1Q9BXS6 441 aaKnown RBP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 TPSD1Q9BZJ3 242 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 AGPAT3Q9NRZ7 376 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 BCCIPQ9P287 314 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 EVLQ9UI08 416 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-214ENST00000580073 PCDHA5Q9Y5H7 936 aa14.2□□□□□ -0.14
TRAF4-214ENST00000580073 K7EQS6 105 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 PTPN1P18031 435 aaKnown RBP14.19□□□□□ -0.14
TRAF4-214ENST00000580073 HOXC13P31276 330 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 GRIA2P42262 883 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 DHPSP49366 369 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-214ENST00000580073 CYP2J2P51589 502 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 GAD2Q05329 585 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 GOLGA8FQ08AF8 430 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 GOLGA8DPQ0D2H9 430 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF252P-AS1Q0IIN9 211 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 TAF10Q12962 218 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 DHCR24Q15392 516 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 SPDYCQ5MJ68 293 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 TCEAL6Q6IPX3 200 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 TTC30AQ86WT1 665 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 MDGA1Q8NFP4 955 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF507Q8TCN5 953 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 SCFD1Q8WVM8 642 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 TCEAL3Q969E4 200 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 FBXO32Q969P5 355 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 SMARCD1Q96GM5 515 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 DUSP9Q99956 384 aaKnown RBP14.19□□□□□ -0.14
TRAF4-214ENST00000580073 DNAI2Q9GZS0 605 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 NACA2Q9H009 215 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 SMOC1Q9H4F8 434 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 ARHGEF4Q9NR80 690 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 RXFP3Q9NSD7 469 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 COMMD8Q9NX08 183 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 CFAP97Q9P2B7 532 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 SH3BP1Q9Y3L3 701 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 ADAMTS9Q9P2N4 1935 aa14.19□□□□□ -0.14
TRAF4-214ENST00000580073 C4orf47A7E2U8 309 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 DCLK1O15075 740 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 MAP3K13O43283 966 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 RHOBTB3O94955 611 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 KAT7O95251 611 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 MYL1P05976 194 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 CEACAM1P13688 526 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 CSRP1P21291 193 aaKnown RBP14.18□□□□□ -0.14
TRAF4-214ENST00000580073 TNFRSF4P43489 277 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 USP46P62068 366 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms