RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	RXFP1	Q9HBX9	757 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	APOBEC3G	Q9HC16	384 aa	Known RBP	4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ALG13	Q9NP73	1137 aa	Known RBP	4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SIX2	Q9NPC8	291 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SAMSN1	Q9NSI8	373 aa	Known RBP	4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GDAP2	Q9NXN4	497 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DPP3	Q9NY33	737 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SPG21	Q9NZD8	308 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KANSL3	Q9P2N6	904 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MSRA	Q9UJ68	235 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ADAM28	Q9UKQ2	775 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ITGA11	Q9UKX5	1188 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SMG5	Q9UPR3	1016 aa	Known RBP	4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MTCH2	Q9Y6C9	303 aa		4.08	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KMT2E	Q8IZD2	1858 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BICDL2	A1A5D9	508 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	C2orf71	A6NGG8	1288 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HIDE1	A8MVS5	230 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GABRD	O14764	452 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CETN3	O15182	167 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AP5Z1	O43299	807 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HCRT	O43612	131 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	OAZ2	O95190	189 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KIF20A	O95235	890 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HLA-DRA	P01903	254 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SOD2	P04179	222 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CTSA	P10619	480 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ATP1A3	P13637	1013 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PTMS	P20962	102 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	IBSP	P21815	317 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GLDC	P23378	1020 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TKT	P29401	623 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	POLR2B	P30876	1174 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GTF2H1	P32780	548 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PPM1A	P35813	382 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LTBR	P36941	435 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PBX1	P40424	430 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	OR1G1	P47890	313 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GCLM	P48507	274 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FMO5	P49326	533 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	VAMP7	P51809	220 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	YARS	P54577	528 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MYL6	P60660	151 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RBM10	P98175	930 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MYL5	Q02045	173 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DSG1	Q02413	1049 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GPM6B	Q13491	265 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SURF1	Q15526	300 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SOWAHA	Q2M3V2	549 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SPOPL	Q6IQ16	392 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SLC8B1	Q6J4K2	584 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DCLRE1A	Q6PJP8	1040 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	INTS8	Q75QN2	995 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CSGALNACT2	Q8N6G5	542 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MRPL43	Q8N983	215 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM181A	Q8N9Y4	354 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BEST2	Q8NFU1	509 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	OR10T2	Q8NGX3	314 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SLC22A17	Q8WUG5	538 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	POF1B	Q8WVV4	589 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AUTS2	Q8WXX7	1259 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MYLIP	Q8WY64	445 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ARNTL2	Q8WYA1	636 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PIK3R5	Q8WYR1	880 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CCDC47	Q96A33	483 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CCDC127	Q96BQ5	260 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MRPL38	Q96DV4	380 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CCDC34	Q96HJ3	373 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SENP8	Q96LD8	212 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CNOT6L	Q96LI5	555 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RPS6KC1	Q96S38	1066 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DIRC2	Q96SL1	478 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CLSTN3	Q9BQT9	956 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SRRT	Q9BXP5	876 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BCO2	Q9BYV7	579 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GPR88	Q9GZN0	384 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LMAN2L	Q9H0V9	348 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	THAP9	Q9H5L6	903 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SOX17	Q9H6I2	414 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CBX8	Q9HC52	389 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM8A	Q9HCN3	771 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM30A	Q9NV96	361 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SLC38A7	Q9NVC3	462 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ANO10	Q9NW15	660 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FANCL	Q9NW38	375 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MTRR	Q9UBK8	725 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HMGXB4	Q9UGU5	601 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LIMA1	Q9UHB6	759 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MTUS1	Q9ULD2	1270 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SOX13	Q9UN79	622 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	L1RE1	Q9UN81	338 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	POLI	Q9UNA4	740 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAN1	Q9Y2M0	1017 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RWDD3	Q9Y3V2	267 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms