RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 MRPL45Q9BRJ2 306 aaKnown RBP17.03■□□□□ 0.32
VAPA-204ENST00000577901 IMPG2Q9BZV3 1241 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 CLSTN2Q9H4D0 955 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TMEM8AQ9HCN3 771 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TM4SF5O14894 197 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 CKMP06732 381 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 USP17L7P0C7H9 530 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 LMO2P25791 158 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 PPP3CAQ08209 521 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 PAK1Q13153 545 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 ZNF77Q15935 545 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 CCDC142Q17RM4 750 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 STPG1Q5TH74 334 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 SYT13Q7L8C5 426 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 FILIP1Q7Z7B0 1213 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 SPATA2LQ8IUW3 424 aaPredicted RBP17.02■□□□□ 0.32
VAPA-204ENST00000577901 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 ATP2A3Q93084 1043 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 SLC22A12Q96S37 553 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 SYT15Q9BQS2 421 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 NUP62CLQ9H1M0 184 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 METTL14Q9HCE5 456 aaKnown RBP17.02■□□□□ 0.32
VAPA-204ENST00000577901 ARMCX3Q9UH62 379 aaPredicted RBP17.02■□□□□ 0.32
VAPA-204ENST00000577901 CTNND2Q9UQB3 1225 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
VAPA-204ENST00000577901 OBSL1O75147 1896 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 CACNA1BQ00975 2339 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 HCRTO43612 131 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 ASS1P00966 412 aaKnown RBP17.01■□□□□ 0.31
VAPA-204ENST00000577901 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 MPLP40238 635 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 IFNAR2P48551 515 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 USP4Q13107 963 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 PLK5Q496M5 336 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 DCAF17Q5H9S7 520 aaPredicted RBP17.01■□□□□ 0.31
VAPA-204ENST00000577901 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
VAPA-204ENST00000577901 TCERG1LQ5VWI1 586 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 TTI2Q6NXR4 508 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 SCN4BQ8IWT1 228 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 EZH1Q92800 747 aaPredicted RBP17.01■□□□□ 0.31
VAPA-204ENST00000577901 CD101Q93033 1021 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
VAPA-204ENST00000577901 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 ANGPTL2Q9UKU9 493 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 DENND4CQ5VZ89 1909 aa17.01■□□□□ 0.31
VAPA-204ENST00000577901 GREB1Q4ZG55 1949 aa17■□□□□ 0.31
VAPA-204ENST00000577901 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
VAPA-204ENST00000577901 A8MXQ7 604 aa17■□□□□ 0.31
VAPA-204ENST00000577901 ATP2C2O75185 946 aa17■□□□□ 0.31
VAPA-204ENST00000577901 FGFR1OPO95684 399 aaKnown RBP17■□□□□ 0.31
VAPA-204ENST00000577901 APBB3O95704 486 aa17■□□□□ 0.31
VAPA-204ENST00000577901 DMC1Q14565 340 aa17■□□□□ 0.31
VAPA-204ENST00000577901 ELF2Q15723 593 aa17■□□□□ 0.31
VAPA-204ENST00000577901 EML3Q32P44 896 aa17■□□□□ 0.31
VAPA-204ENST00000577901 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
VAPA-204ENST00000577901 ARL14EPQ8N8R7 260 aaPredicted RBP17■□□□□ 0.31
VAPA-204ENST00000577901 MLKLQ8NB16 471 aa17■□□□□ 0.31
VAPA-204ENST00000577901 TAS1R2Q8TE23 839 aa17■□□□□ 0.31
VAPA-204ENST00000577901 SH3RF2Q8TEC5 729 aa17■□□□□ 0.31
VAPA-204ENST00000577901 ACDQ96AP0 544 aa17■□□□□ 0.31
VAPA-204ENST00000577901 DUSP9Q99956 384 aaKnown RBP17■□□□□ 0.31
VAPA-204ENST00000577901 DUSP15Q9H1R2 295 aaPredicted RBP17■□□□□ 0.31
VAPA-204ENST00000577901 SMYD3Q9H7B4 428 aa17■□□□□ 0.31
VAPA-204ENST00000577901 GCNT4Q9P109 453 aa17■□□□□ 0.31
VAPA-204ENST00000577901 MAGEC2Q9UBF1 373 aaPredicted RBP17■□□□□ 0.31
VAPA-204ENST00000577901 EBF1Q9UH73 591 aa17■□□□□ 0.31
VAPA-204ENST00000577901 C2orf78A6NCI8 922 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 DCLK1O15075 740 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 RHOBTB1O94844 696 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 GNA14O95837 355 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 PTPN1P18031 435 aaKnown RBP16.99■□□□□ 0.31
VAPA-204ENST00000577901 TRIM21P19474 475 aaKnown RBP16.99■□□□□ 0.31
VAPA-204ENST00000577901 PMLP29590 882 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 MAGEA11P43364 429 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 MXI1P50539 228 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 CDH8P55286 799 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 STX17P56962 302 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
VAPA-204ENST00000577901 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 NR1H3Q13133 447 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 FBXL13Q8NEE6 735 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 MYCBPAPQ8TBZ2 947 aa16.99■□□□□ 0.31
VAPA-204ENST00000577901 HDCP19113 662 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 SPOPLQ6IQ16 392 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 SCARA5Q6ZMJ2 495 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 TCEAL3Q969E4 200 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 FAXDC2Q96IV6 333 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 TNIP3Q96KP6 325 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
VAPA-204ENST00000577901 DNAI2Q9GZS0 605 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 LINC00597Q9H2U6 94 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 CYP3A43Q9HB55 503 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms