RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	ESRRA	P11474	423 aa	Predicted RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ASPA	P45381	313 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	PTDSS1	P48651	473 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	YARS	P54577	528 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	GBE1	Q04446	702 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	DENND1A	Q8TEH3	1009 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	RPF1	Q9H9Y2	349 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	GOLGA2P5	Q9HBQ8	144 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	PIM2	Q9P1W9	311 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	GREB1L	Q9C091	1923 aa	Predicted RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ALOX15B	O15296	676 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	PEX11A	O75192	247 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	IGFBP6	P24592	240 aa	Predicted RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	MAN1A1	P33908	653 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	RPL10A	P62906	217 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	TNFAIP1	Q13829	316 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	PDK4	Q16654	411 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	HADH	Q16836	314 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	TLDC1	Q6P9B6	456 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ATP11C	Q8NB49	1132 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	AZIN2	Q96A70	460 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ANKRD36BP1	Q96IX9	119 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ACO2	Q99798	780 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	THTPA	Q9BU02	230 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CADM1	Q9BY67	442 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	C20orf27	Q9GZN8	174 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	TXLNG	Q9NUQ3	528 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	UBP1	Q9NZI7	540 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ARHGAP42	A6NI28	874 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001		B2RBV5	119 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	COPE	O14579	308 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	GSTA1	P08263	222 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	TROVE2	P10155	538 aa	Known RBP eCLIP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CD1E	P15812	388 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ARL2	P36404	184 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	THEMIS2	Q5TEJ8	643 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CES4A	Q5XG92	561 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	DENND5B	Q6ZUT9	1274 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	NIPA1	Q7RTP0	329 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CLNK	Q7Z7G1	428 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	PPIL6	Q8IXY8	311 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CFAP61	Q8NHU2	1237 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	MAN1C1	Q9NR34	630 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	SMYD2	Q9NRG4	433 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	ZC3H7B	Q9UGR2	993 aa	Known RBP	15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	SIX4	Q9UIU6	781 aa		15.44	■□□□□ 0.06
PRPF8-216	ENST00000577001	CAPN9	O14815	690 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	HOXC6	P09630	235 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	TBXAS1	P24557	533 aa	Predicted RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ROR1	Q01973	937 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	IFRD2	Q12894	506 aa	Predicted RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	DALRD3	Q5D0E6	543 aa	Known RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	PPM1J	Q5JR12	505 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	SLFN12L	Q6IEE8	588 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	FAM183BP	Q6ZVS7	135 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	CROCCP2	Q86T23	111 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	BRSK2	Q8IWQ3	736 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ZBTB8OS	Q8IWT0	167 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	CCNY	Q8ND76	341 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	NLRP7	Q8WX94	980 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	TXNRD2	Q9NNW7	524 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	MKI67	P46013	3256 aa	Known RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	SRRM3	A6NNA2	597 aa	Predicted RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	PRPSAP2	O60256	369 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	TBC1D12	O60347	775 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	PDE5A	O76074	875 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ZBED1	O96006	694 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	STAG3L1	P0CL83	205 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	AKAP5	P24588	427 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	RXRB	P28702	533 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	CAV1	Q03135	178 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	KIZ	Q2M2Z5	673 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ZNF772	Q68DY9	489 aa	Predicted RBP	15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ASRGL1	Q7L266	308 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	FAM131B	Q86XD5	332 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	NDUFAF2	Q8N183	169 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	BBOF1	Q8ND07	529 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	AGBL3	Q8NEM8	1001 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	OR6B3	Q8NGW1	331 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	VTI1A	Q96AJ9	217 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	CCDC134	Q9H6E4	229 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	ETNK2	Q9NVF9	386 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	DLGAP2	Q9P1A6	1054 aa		15.43	■□□□□ 0.06
PRPF8-216	ENST00000577001	IRF6	O14896	467 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	OGT	O15294	1046 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	TYROBP	O43914	113 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	CYP3A5	P20815	502 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	CCND1	P24385	295 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	BCAR1	P56945	870 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	PITX1	P78337	314 aa	Predicted RBP	15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	ZNF200	P98182	395 aa	Predicted RBP	15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	MOGS	Q13724	837 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	XYLT1	Q86Y38	959 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	NAF1	Q96HR8	494 aa	Known RBP	15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	LGMN	Q99538	433 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	DPEP3	Q9H4B8	488 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	TSPAN16	Q9UKR8	245 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	CREB3	O43889	395 aa		15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	TXN	P10599	105 aa	Known RBP	15.42	■□□□□ 0.06
PRPF8-216	ENST00000577001	CYP2C8	P10632	490 aa		15.42	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms