RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MAOBP27338 520 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ABCD1P33897 745 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 HOXD12P35452 270 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CACNA2D1P54289 1103 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 GAD2Q05329 585 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC36A4Q6YBV0 504 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CCNI2Q6ZMN8 369 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 DPH6Q7L8W6 267 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 SLCO6A1Q86UG4 719 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 RGL4Q8IZJ4 473 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF513Q8N8E2 541 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 RASSF8Q8NHQ8 419 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ADAMTS14Q8WXS8 1223 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 LARP4BQ92615 738 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ACOX2Q99424 681 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 TTLL2Q9BWV7 592 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 MTMR12Q9C0I1 747 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CCDC86Q9H6F5 360 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CD93Q9NPY3 652 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CHORDC1Q9UHD1 332 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 ITGA11Q9UKX5 1188 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CDH9Q9ULB4 789 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 CYP8B1Q9UNU6 501 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 NME7Q9Y5B8 376 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 HELZP42694 1942 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 PCDH15Q96QU1 1955 aa10.79□□□□□ -0.68
NPLOC4-220ENST00000576940 GCN1Q92616 2671 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 A0A1W2PQD8 194 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 A0A1W2PQF6 199 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC26A4O43511 780 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 TULP3O75386 442 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 GJB3O75712 270 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 LDHAP00338 332 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 SYPP08247 313 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 HOXB2P14652 356 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 PLEKHG6Q3KR16 790 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 MDH1BQ5I0G3 518 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 C10orf76Q5T2E6 689 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 TDRD10Q5VZ19 366 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 HS2ST1Q7LGA3 356 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 MARCH9Q86YJ5 346 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 ETFBKMTQ8IXQ9 262 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 OR5B17Q8NGF7 314 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 WBP2Q969T9 261 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 ZNF419Q96HQ0 510 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 HPDLQ96IR7 371 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 LRIG1Q96JA1 1093 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 HSPA12BQ96MM6 686 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 ACCSQ96QU6 501 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 MRPL45Q9BRJ2 306 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 CBWD1Q9BRT8 395 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 SLC6A17Q9H1V8 727 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 MRPL44Q9H9J2 332 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 TMEM30AQ9NV96 361 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 TBC1D14Q9P2M4 693 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 DEC1Q9P2X7 70 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 ASXL3Q9C0F0 2248 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
NPLOC4-220ENST00000576940 BPTFQ12830 3046 aa10.77□□□□□ -0.68
NPLOC4-220ENST00000576940 TRIM66O15016 1216 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 CST3P01034 146 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 TMEM191BP0C7N4 346 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 NDUFV2P19404 249 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 WARSP23381 471 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 NTSR1P30989 418 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 GNL1P36915 607 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 PPP3CCP48454 512 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 CASP5P51878 434 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 NOP14P78316 857 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 MYO1EQ12965 1108 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 SLC14A1Q13336 389 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 MAPRE1Q15691 268 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 ANO4Q32M45 955 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 L1TD1Q5T7N2 865 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 BTBD8Q5XKL5 378 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 EGFLAMQ63HQ2 1017 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 USP49Q70CQ1 688 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 NAXDQ8IW45 347 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 BBS7Q8IWZ6 715 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 KIAA1958Q8N8K9 716 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 IPO4Q8TEX9 1081 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 COL26A1Q96A83 441 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 HVCN1Q96D96 273 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 EPSTI1Q96J88 318 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 C8orf48Q96LL4 319 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 CEP295NLQ96MC4 621 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 MMS19Q96T76 1030 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 KIF2CQ99661 725 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms