RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TLCD1Q96CP7 247 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ZNF184Q99676 751 aaPredicted RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 DEFB129Q9H1M3 183 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 CDY2AQ9Y6F7 541 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 CDY1Q9Y6F8 540 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 TM9SF1O15321 606 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 GFAPP14136 432 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 GLRA2P23416 452 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 TBL3Q12788 808 aaKnown RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ZBTB46Q86UZ6 589 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 GMCL1P1Q8NEA9 526 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ZSCAN18Q8TBC5 510 aaPredicted RBP18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 PTPRHQ9HD43 1115 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 STARD13Q9Y3M8 1113 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 LIASO43766 372 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 CYP1A2P05177 515 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 MLH1P40692 756 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 UGCGQ16739 394 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ELMO2Q96JJ3 720 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 ACSS2Q9NR19 701 aa18.52■□□□□ 0.56
ATPAF1-214ENST00000576409 MYH2Q9UKX2 1941 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 BNIP1Q12981 228 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 MXD4Q14582 209 aaPredicted RBP18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 ZDHHC24Q6UX98 284 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 MICALL2Q8IY33 904 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 HAUS8Q9BT25 410 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 SPON2Q9BUD6 331 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 SOX13Q9UN79 622 aa18.52■□□□□ 0.55
ATPAF1-214ENST00000576409 PTPN11Q06124 597 aaPredicted RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 PGM5Q15124 567 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 TRMT5Q32P41 509 aaKnown RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 C6orf10Q5SRN2 563 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 DCAF12L1Q5VU92 463 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 CGRRF1Q99675 332 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 C17orf75Q9HAS0 396 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 C3orf70A6NLC5 250 aaPredicted RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 EDF1O60869 148 aaKnown RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 PGK2P07205 417 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 RNF43Q68DV7 783 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 MTHFD1LQ6UB35 978 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 ILKAPQ9H0C8 392 aaPredicted RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 DENND2DQ9H6A0 471 aaPredicted RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 CPA3P15088 417 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 HIRAP54198 1017 aaPredicted RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 ZNF786Q8N393 782 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 TMEM161BQ8NDZ6 487 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 VAV3Q9UKW4 847 aa18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 PIN4Q9Y237 131 aaKnown RBP18.51■□□□□ 0.55
ATPAF1-214ENST00000576409 ZC3H11AO75152 810 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 FAM155BO75949 473 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 DPYSL3Q14195 570 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 GDPD5Q8WTR4 605 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 NRBF2Q96F24 287 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 APOPT1Q96IL0 206 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 SIX2Q9NPC8 291 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 AVENQ9NQS1 362 aaPredicted RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 CYP3A7-CYP3A51PA0A087WV96 503 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 EEF2KO00418 725 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 PAMP19021 973 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 CYP3A7P24462 503 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 UBAP2LQ14157 1087 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 OASLQ15646 514 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 LACTB2Q53H82 288 aaPredicted RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 PDPK2PQ6A1A2 396 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 STRA8Q7Z7C7 330 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 CPB2Q96IY4 423 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 SLITRK1Q96PX8 696 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 ASCC2Q9H1I8 757 aaPredicted RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 WDR27A2RRH5 827 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 MGRN1O60291 552 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 RAG1P15918 1043 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 FOXN2P32314 431 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 TTLL4Q14679 1199 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 DENND1BQ6P3S1 775 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 MAP4K3Q8IVH8 894 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 PIF1Q9H611 641 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 STX18Q9P2W9 335 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
ATPAF1-214ENST00000576409 A0A0B4J269 797 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 DPPA5A6NC42 116 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 SYCE1LA8MT33 242 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 CHEK2O96017 543 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 HMGCRP04035 888 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 AMPD1P23109 780 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 CCDC60Q8IWA6 550 aaPredicted RBP18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 UNC45BQ8IWX7 931 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 KATNAL2Q8IYT4 538 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 PPP1R13LQ8WUF5 828 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 CNPY3Q9BT09 278 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 MTFR1LQ9H019 292 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 CCDC134Q9H6E4 229 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 NMRK1Q9NWW6 199 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 M0QYT0 321 aa18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 MRPS22P82650 360 aaKnown RBP18.49■□□□□ 0.55
ATPAF1-214ENST00000576409 SPDYCQ5MJ68 293 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms