RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 LAMA3Q16787 3333 aa13.08□□□□□ -0.32
CXCL16-204ENST00000575168 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 LINC01565O15544 149 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 BEST1O76090 585 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 CALCAP01258 141 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 FECHP22830 423 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 MMP8P22894 467 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 GABRB2P47870 512 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 RPL34P49207 117 aaKnown RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 RGS7P49802 495 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 CDR1P51861 262 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 EPHA5P54756 1037 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 IFRD2Q12894 506 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 E4F1Q66K89 784 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 PM20D1Q6GTS8 502 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 RNF139Q8WU17 664 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 CPA5Q8WXQ8 436 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 PDLIM2Q96JY6 352 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 MRPL47Q9HD33 250 aaKnown RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 ZFP37Q9Y6Q3 630 aaPredicted RBP13.07□□□□□ -0.32
CXCL16-204ENST00000575168 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
CXCL16-204ENST00000575168 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 HHLA1C9JL84 531 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 E5RJQ4 531 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■□□ 17.8
CXCL16-204ENST00000575168 CAPN9O14815 690 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 ARHGAP6O43182 974 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 FTLP02792 175 aaPredicted RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 RHOP08100 348 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 MYL4P12829 197 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 GPR15P49685 360 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 TUBP50607 506 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 MRPS5P82675 430 aaKnown RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 GOLGA8FQ08AF8 430 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 GOLGA8DPQ0D2H9 430 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 TAF10Q12962 218 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 SMAD4Q13485 552 aaKnown RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 SDHAF4Q5VUM1 108 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 OR6B2Q6IFH4 312 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 RSRC2Q7L4I2 434 aaKnown RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 GRASPQ7Z6J2 395 aaPredicted RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 LRRC8AQ8IWT6 810 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 CPXM1Q96SM3 734 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 CHP1Q99653 195 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 ULBP1Q9BZM6 244 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 NACA2Q9H009 215 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 ISCUQ9H1K1 167 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 MRPS23Q9Y3D9 190 aaKnown RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
CXCL16-204ENST00000575168 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
CXCL16-204ENST00000575168 A0A087X0T9 212 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 TMCO5BA8MYB1 307 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 EIF3CLB5ME19 914 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 HSF2BPO75031 334 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 TBX10O75333 385 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 NDUFA10O95299 355 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 ABL1P00519 1130 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 FAM228BP0C875 321 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 HMGA1P17096 107 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 KCNA5P22460 613 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 FSHRP23945 695 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 GABRR2P28476 465 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 DAOAP59103 153 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 YWHAZP63104 245 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 GPC5P78333 572 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SLC6A3Q01959 620 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 PTPN20Q4JDL3 420 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SYCE2Q6PIF2 218 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 MMS22LQ6ZRQ5 1243 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 BEND5Q7L4P6 421 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 MCOLN2Q8IZK6 566 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms