RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 MICALL2Q8IY33 904 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 VTI1AQ96AJ9 217 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 PCDHB18PQ96TA0 734 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 R3HDMLQ9H3Y0 253 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 AGPAT3Q9NRZ7 376 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 FOSP01100 380 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 ABHD2P08910 425 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 ALOX15P16050 662 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 RFX1P22670 979 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 CRABP2P29373 138 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 RFC1P35251 1148 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 COPAP53621 1224 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 KIF22Q14807 665 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 UGCGQ16739 394 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 RHBDF2Q6PJF5 856 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 NCCRP1Q6ZVX7 275 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 CCDC80Q76M96 950 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 LPCAT2Q7L5N7 544 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 RSPH3Q86UC2 560 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 TRIM50Q86XT4 487 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 PPP4R1Q8TF05 950 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 ACSF2Q96CM8 615 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 PTCD3Q96EY7 689 aaKnown RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 CAAP1Q9H8G2 361 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 FEM1BQ9UK73 627 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 SCINQ9Y6U3 715 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 CALCAP01258 141 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 C6orf222P0C671 652 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 KRT72Q14CN4 511 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 CEP55Q53EZ4 464 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 DEFB107AQ8IZN7 70 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 ZSWIM2Q8NEG5 633 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 FBXO27Q8NI29 283 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 DENND1AQ8TEH3 1009 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 FAM81BQ96LP2 452 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 ZMAT2Q96NC0 199 aaKnown RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 SENP7Q9BQF6 1050 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 HAUS8Q9BT25 410 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 GPR88Q9GZN0 384 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 PAIP1Q9H074 479 aaKnown RBP9.96□□□□□ -0.81
CCDC40-212ENST00000574799 MAD1L1Q9Y6D9 718 aa9.96□□□□□ -0.81
CCDC40-212ENST00000574799 TMEM150BA6NC51 233 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 DNALI1O14645 258 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-212ENST00000574799 XPOTO43592 962 aaKnown RBP9.96□□□□□ -0.82
CCDC40-212ENST00000574799 STBD1O95210 358 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 TNFAIP8O95379 198 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 GZMAP12544 262 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 HDAC4P56524 1084 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 ATP1A4Q13733 1029 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 TMEM63BQ5T3F8 832 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 FBXO36Q8NEA4 188 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
CCDC40-212ENST00000574799 MECRQ9BV79 373 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 DNPEPQ9ULA0 475 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 BARX2Q9UMQ3 279 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-212ENST00000574799 UBIAD1Q9Y5Z9 338 aa9.96□□□□□ -0.82
CCDC40-212ENST00000574799 PEX1O43933 1283 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 KRT37O76014 449 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 CA8P35219 290 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-212ENST00000574799 C12orf50Q8NA57 414 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-212ENST00000574799 EPS8L1Q8TE68 723 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 DDI1Q8WTU0 396 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 TMEM121Q9BTD3 319 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 DMTF1Q9Y222 760 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 WDR37Q9Y2I8 494 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 AK5Q9Y6K8 562 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 MYOCOSA0A1B0GUC4 107 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 TRIM49D1C9J1S8 452 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 ADCY6O43306 1168 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 PEX10O60683 326 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 CYP11B1P15538 503 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 IGBP1P78318 339 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 DENND5BQ6ZUT9 1274 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 PDSS2Q86YH6 399 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 SYTL5Q8TDW5 730 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-212ENST00000574799 FAM172AQ8WUF8 416 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 MXRA8Q9BRK3 442 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 PPCSQ9HAB8 311 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 SELENONQ9NZV5 590 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 GIPC1O14908 333 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 TLR3O15455 904 aaKnown RBP9.95□□□□□ -0.82
CCDC40-212ENST00000574799 CCNE2O96020 404 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 ASNSP08243 561 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 FAM58BPP0C7Q3 252 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 DLG4P78352 724 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 PHEXP78562 749 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 FSTL1Q12841 308 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 STX3Q13277 289 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 LLGL2Q6P1M3 1020 aa9.95□□□□□ -0.82
CCDC40-212ENST00000574799 ZCCHC23Q6ZST2 131 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms