RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 IL37Q9NZH6 218 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 MAN1B1Q9UKM7 699 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 FRYLO94915 3013 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 ATP8B3O60423 1300 aa12□□□□□ -0.49
RPAIN-214ENST00000574003 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
RPAIN-214ENST00000574003 HHLA1C9JL84 531 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 MDM4O15151 490 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CETN3O15182 167 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CILPO75339 1184 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 RTN3O95197 1032 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-214ENST00000574003 TBX18O95935 607 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CYP17A1P05093 508 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 EPB41P11171 864 aaKnown RBP11.99□□□□□ -0.49
RPAIN-214ENST00000574003 TCF3P15923 654 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 OPRD1P41143 372 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 SLC6A11P48066 632 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 MXI1P50539 228 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 INCA1Q0VD86 236 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-214ENST00000574003 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 KLHL10Q6JEL2 608 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 C1orf228Q6PIY5 440 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 MAMSTRQ6ZN01 415 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CLEC20AQ6ZU45 233 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 UNC93AQ86WB7 457 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 C12orf40Q86WS4 652 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 SPATA20Q8TB22 786 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 RUBCNQ92622 972 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CD101Q93033 1021 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
RPAIN-214ENST00000574003 CEP295NLQ96MC4 621 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 HHIPQ96QV1 700 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 IER2Q9BTL4 223 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 EPC1Q9H2F5 836 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 NMUR1Q9HB89 426 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 OSER1Q9NX31 292 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 NCDNQ9UBB6 729 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 NUDT5Q9UKK9 219 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 SPTBN2O15020 2390 aa11.99□□□□□ -0.49
RPAIN-214ENST00000574003 BIN1O00499 593 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 CYP26A1O43174 497 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 SMC2O95347 1197 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 FAM200BP0CF97 657 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 BMP6P22004 513 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 SEC13P55735 322 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 LRMPQ12912 555 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 DHCR24Q15392 516 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 KRT39Q6A163 491 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
RPAIN-214ENST00000574003 RPLP0P6Q8NHW5 317 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 ATP2A3Q93084 1043 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 GSDMAQ96QA5 445 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 HNRNPABQ99729 332 aaKnown RBP11.98□□□□□ -0.49
RPAIN-214ENST00000574003 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 IMPG2Q9BZV3 1241 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 CYP3A43Q9HB55 503 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 CSNK1G1Q9HCP0 422 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 ZDHHC4Q9NPG8 344 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 RMND1Q9NWS8 449 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 RAB20Q9NX57 234 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 EHD2Q9NZN4 543 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 DCHS1Q96JQ0 3298 aa11.98□□□□□ -0.49
RPAIN-214ENST00000574003 DMXL1Q9Y485 3027 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 SPAG17Q6Q759 2223 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 ZDHHC11BP0C7U3 371 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 ACO1P21399 889 aaKnown RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 GTF2H1P32780 548 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 PPP3CCP48454 512 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 PDE6CP51160 858 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 STX17P56962 302 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 MCCD1P59942 119 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 SIM2Q14190 667 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 HECTD3Q5T447 861 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 BBS7Q8IWZ6 715 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 ADGRG2Q8IZP9 1017 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 SLC4A11Q8NBS3 891 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 FBXL13Q8NEE6 735 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 NDRG1Q92597 394 aaKnown RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 RMDN1Q96DB5 314 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 CCDC34Q96HJ3 373 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 HEXIM2Q96MH2 286 aaKnown RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 TIGD1Q96MW7 591 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 TSG101Q99816 390 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 DUSP9Q99956 384 aaKnown RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 FAM126AQ9BYI3 521 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-214ENST00000574003 CISHQ9NSE2 258 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 EML5Q05BV3 1969 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 KIAA1549LQ6ZVL6 1849 aa11.97□□□□□ -0.49
RPAIN-214ENST00000574003 RALGAPA1Q6GYQ0 2036 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 FAM92AA1XBS5 289 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 K7EQS6 105 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 TRIM24O15164 1050 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 TLR5O60602 858 aa11.96□□□□□ -0.49
RPAIN-214ENST00000574003 PAPSS2O95340 614 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-214ENST00000574003 NFATC1O95644 943 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms