RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 MED7O43513 233 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 TBX10O75333 385 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 RNF8O76064 485 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 IL1BP01584 269 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 PRKCBP05771 671 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 UBA1P22314 1058 aaKnown RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 STIP1P31948 543 aaKnown RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 GCLCP48506 637 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 KLC1Q07866 573 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 CCDC62Q6P9F0 684 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 CDR2LQ86X02 465 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 DTX3LQ8TDB6 740 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 RSAD1Q9HA92 442 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 HMGXB4Q9UGU5 601 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 TTLL3Q9Y4R7 772 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 SPDYE5A6NIY4 337 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 KRT19P08727 400 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 CPA2P48052 419 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 STAT5BP51692 787 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 CES4AQ5XG92 561 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 SLC26A11Q86WA9 606 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 CTAGE3PQ8IX95 158 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 PPM1NQ8N819 430 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 SCG3Q8WXD2 468 aaKnown RBP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 WDR35Q9P2L0 1181 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 KCNA3P22001 575 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 CDH6P55285 790 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 LAMTOR4Q0VGL1 99 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 SURF1Q15526 300 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 TTC39BQ5VTQ0 682 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 C1orf228Q6PIY5 440 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 CYP4V2Q6ZWL3 525 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 SLC4A11Q8NBS3 891 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 RNF149Q8NC42 400 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 UCMAQ8WVF2 138 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 MCRS1Q96EZ8 462 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 ZNF668Q96K58 619 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 RAB6BQ9NRW1 208 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCARF1-206ENST00000573852 AFG3L2Q9Y4W6 797 aa19.86■□□□□ 0.77
SCARF1-206ENST00000573852 ENO4A6NNW6 628 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 KLF11O14901 512 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 FARP2O94887 1054 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 ENDOD1O94919 500 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 TNNC2P02585 160 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 YWHAZP63104 245 aaKnown RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 IRX1P78414 480 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 SLC34A1Q06495 639 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 DOCK1Q14185 1865 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 TMEM154Q6P9G4 183 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 CFAP61Q8NHU2 1237 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 FBXO27Q8NI29 283 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 ZNF483Q8TF39 744 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 ZNF395Q9H8N7 513 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 PLAC1Q9HBJ0 212 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 USP29Q9HBJ7 922 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 PNPLA8Q9NP80 782 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 H7C0C1 242 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 PPP1R12AO14974 1030 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 CHADO15335 359 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 ATP5OP48047 213 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 LRRC74BQ6ZQY2 392 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 TREML1Q86YW5 311 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 LRRC71Q8N4P6 559 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 ANKRD36BP1Q96IX9 119 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 IQCGQ9H095 443 aaKnown RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 MMADHCQ9H3L0 296 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.85■□□□□ 0.77
SCARF1-206ENST00000573852 SIX4Q9UIU6 781 aa19.85■□□□□ 0.77
SCARF1-206ENST00000573852 MAP3K13O43283 966 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 PEX10O60683 326 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 SPAG6O75602 509 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 MICAL2O94851 1124 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 DPEP1P16444 411 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 OCRLQ01968 901 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 FAXCQ5TGI0 409 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 TRNP1Q6NT89 227 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 CATSPERGQ6ZRH7 1159 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 RFX8Q6ZV50 586 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 TMEM192Q8IY95 271 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 BCO2Q9BYV7 579 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 ASCC2Q9H1I8 757 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-206ENST00000573852 SMYD3Q9H7B4 428 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 AS3MTQ9HBK9 375 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 PLLPQ9Y342 182 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 ANK1P16157 1881 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 B4GALT4O60513 344 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 UGT1A9O60656 530 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 PGM1P36871 562 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 MRPS5P82675 430 aaKnown RBP19.84■□□□□ 0.77
SCARF1-206ENST00000573852 BST1Q10588 318 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 FAM102AQ5T9C2 384 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-206ENST00000573852 PRAMEF18Q5VWM3 479 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 FAM91A1Q658Y4 838 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 SAMD7Q7Z3H4 446 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 C12orf42Q96LP6 360 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 WRNIP1Q96S55 665 aa19.84■□□□□ 0.77
SCARF1-206ENST00000573852 ELOVL4Q9GZR5 314 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms