RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 L1RE1Q9UN81 338 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 ALG6Q9Y672 507 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 PATJQ8NI35 1801 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CASTOR2A6NHX0 329 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 KPNA7A9QM74 516 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 NT5C1B-RDH14C9J2C7 533 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 MED7O43513 233 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 TADA2AO75478 443 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 POMCP01189 267 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 ERBB2P04626 1255 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 RHOXF2BP0C7M4 288 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 VDRP11473 427 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 MMP8P22894 467 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 OR1G1P47890 313 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CLCN5P51795 746 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 PTPN5P54829 565 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 RNASE9P60153 205 aaKnown RBP10.1□□□□□ -0.79
NDE1-208ENST00000573694 RBM10P98175 930 aaKnown RBP10.1□□□□□ -0.79
NDE1-208ENST00000573694 CLUL1Q15846 466 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CCDC181Q5TID7 509 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 DAB2IPQ5VWQ8 1189 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 PLEKHA7Q6IQ23 1121 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CCDC149Q6ZUS6 474 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 ACOT1Q86TX2 421 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 C12orf29Q8N999 325 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 TDRD5Q8NAT2 981 aaKnown RBP10.1□□□□□ -0.79
NDE1-208ENST00000573694 C3orf58Q8NDZ4 430 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 OR6B3Q8NGW1 331 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 PIK3R5Q8WYR1 880 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 PBXIP1Q96AQ6 731 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 HEXIM2Q96MH2 286 aaKnown RBP10.1□□□□□ -0.79
NDE1-208ENST00000573694 RHOXF2Q9BQY4 288 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 ANKZF1Q9H8Y5 726 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 WDR6Q9NNW5 1121 aaKnown RBP10.1□□□□□ -0.79
NDE1-208ENST00000573694 MUTYHQ9UIF7 546 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 CEP83Q9Y592 693 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 MYO10Q9HD67 2058 aa10.1□□□□□ -0.79
NDE1-208ENST00000573694 MYO16Q9Y6X6 1858 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 GOLGA8SH3BPF8 625 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PODXLO00592 558 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CES2O00748 559 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 SPOPO43791 374 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CEP104O60308 925 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CALB1P05937 261 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CCDC130P13994 396 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 LMO2P25791 158 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PBX3P40426 434 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PNPLA4P41247 253 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CLCNKBP51801 687 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 LILRA4P59901 499 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 ZNF211Q13398 564 aaPredicted RBP10.09□□□□□ -0.79
NDE1-208ENST00000573694 MAMLD1Q13495 774 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PPP1R26Q5T8A7 1209 aaPredicted RBP10.09□□□□□ -0.79
NDE1-208ENST00000573694 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 DNAJC24Q6P3W2 148 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 FUT10Q6P4F1 479 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 FBXO38Q6PIJ6 1188 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 ANKS3Q6ZW76 656 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 LIMS2Q7Z4I7 341 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
NDE1-208ENST00000573694 ADGRF2Q8IZF7 708 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 UBA3Q8TBC4 463 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CD101Q93033 1021 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PBKQ96KB5 322 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 MCEEQ96PE7 176 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 CPXM1Q96SM3 734 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PNKPQ96T60 521 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PAAF1Q9BRP4 392 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 TTPALQ9BTX7 342 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 VN1R3Q9BXE9 311 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 ZNF518BQ9C0D4 1074 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
NDE1-208ENST00000573694 MARCH5Q9NX47 278 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 BACE2Q9Y5Z0 518 aa10.09□□□□□ -0.79
NDE1-208ENST00000573694 PTPRZ1P23471 2315 aaPredicted RBP10.08□□□□□ -0.8
NDE1-208ENST00000573694 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
NDE1-208ENST00000573694 ARHGEF37A1IGU5 675 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 A8MXQ7 604 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 TULP2O00295 520 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 PIK3R2O00459 728 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 CYB561D2O14569 222 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 SYN3O14994 580 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 TEX28O15482 410 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 B4GALT3O60512 393 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
NDE1-208ENST00000573694 ACAT1P24752 427 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms