RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 NIF3L1Q9GZT8 377 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 RNF38Q9H0F5 515 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 LINC00597Q9H2U6 94 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 GMIPQ9P107 970 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 CFAP97Q9P2B7 532 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 SH3BP1Q9Y3L3 701 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 NUP205Q92621 2012 aa10.23□□□□□ -0.77
NPLOC4-212ENST00000573328 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CETN3O15182 167 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 SMC2O95347 1197 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CCDC192P0DO97 292 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 IRF1P10914 325 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CNR2P34972 360 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 MXI1P50539 228 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 SEC13P55735 322 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 PPP3CAQ08209 521 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 EDRF1Q3B7T1 1238 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 C1orf220Q5T0J3 134 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 HECTD3Q5T447 861 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 KRT39Q6A163 491 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 WDR5BQ86VZ2 330 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 FUKQ8N0W3 1084 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 C12orf29Q8N999 325 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 SMARCE1Q969G3 411 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 ACDQ96AP0 544 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 NT5C1AQ9BXI3 368 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 FBXO44Q9H4M3 255 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 TMEM8AQ9HCN3 771 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 HOOK1Q9UJC3 728 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 SDK1Q7Z5N4 2213 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
NPLOC4-212ENST00000573328 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 CEP250Q9BV73 2442 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 COCHO43405 550 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 STX10O60499 249 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 BEST1O76090 585 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 OLFM2O95897 454 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ADH1CP00326 375 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 CYP17A1P05093 508 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ZXDBP98169 803 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 KDSRQ06136 332 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 SPEM2Q0P670 501 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 STIM1Q13586 685 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ZCWPW2Q504Y3 356 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ZNF394Q53GI3 561 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ZNF658Q5TYW1 1059 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 PAQR9Q6ZVX9 377 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 FMR1NBQ8N0W7 255 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 FBXL13Q8NEE6 735 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 CCDC26Q8TAB7 109 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 RMDN1Q96DB5 314 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 CYFIP2Q96F07 1278 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 TWNKQ96RR1 684 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 SMOQ99835 787 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 CYP3A43Q9HB55 503 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 APOBEC3GQ9HC16 384 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 FBRSL1Q9HCM7 1045 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 TLR8Q9NR97 1041 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 COMMD8Q9NX08 183 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 TBC1D14Q9P2M4 693 aa10.21□□□□□ -0.77
NPLOC4-212ENST00000573328 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 HRO43593 1189 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 TLR5O60602 858 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 RPP40O75818 363 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 RETP07949 1114 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 ADH5P11766 374 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 ACO1P21399 889 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 HOXC13P31276 330 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 GTF2H1P32780 548 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 PRCPP42785 496 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 LMNB2Q03252 620 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 ENPEPQ07075 957 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 GOLGA8FQ08AF8 430 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 GOLGA8DPQ0D2H9 430 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 DMC1Q14565 340 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 DHCR24Q15392 516 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 RSPO4Q2I0M5 234 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 C2orf27AQ580R0 203 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 CLEC20AQ6ZU45 233 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 ERMP1Q7Z2K6 904 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 DGLUCYQ7Z3D6 616 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 CRYBG2Q8N1P7 616 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 ZMIZ2Q8NF64 920 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 GSDMAQ96QA5 445 aa10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 POLR3BQ9NW08 1133 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-212ENST00000573328 E2F8A0AVK6 867 aa10.19□□□□□ -0.78
NPLOC4-212ENST00000573328 TRIM49BA6NDI0 452 aa10.19□□□□□ -0.78
NPLOC4-212ENST00000573328 AXIN1O15169 862 aa10.19□□□□□ -0.78
NPLOC4-212ENST00000573328 SLC16A3O15427 465 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-212ENST00000573328 CYP26A1O43174 497 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms