RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 M0QYV0 167 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 TULP2O00295 520 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 EPHB6O15197 1021 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 YWHAQP27348 245 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 VIPR2P41587 438 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 TDGQ13569 410 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 UBA3Q8TBC4 463 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 RSPRY1Q96DX4 576 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 SLITRK1Q96PX8 696 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 PLA2G2FQ9BZM2 168 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 GPR88Q9GZN0 384 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 IRF2BPLQ9H1B7 796 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 GANQ9H2C0 597 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 GMIPQ9P107 970 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHD3-215ENST00000572750 SIK3Q9Y2K2 1263 aa16.69■□□□□ 0.26
CHD3-215ENST00000572750 COL4A2P08572 1712 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 CYP26A1O43174 497 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 GALR2O43603 387 aaPredicted RBP16.68■□□□□ 0.26
CHD3-215ENST00000572750 ABL1P00519 1130 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 UCHL3P15374 230 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 RFX1P22670 979 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 DDX6P26196 483 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHD3-215ENST00000572750 GNA15P30679 374 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 PDE4CQ08493 712 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 BST2Q10589 180 aaKnown RBP16.68■□□□□ 0.26
CHD3-215ENST00000572750 GRM2Q14416 872 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 PIGZQ86VD9 579 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 ARID3BQ8IVW6 561 aaPredicted RBP16.68■□□□□ 0.26
CHD3-215ENST00000572750 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 SLC44A3Q8N4M1 653 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 ELSPBP1Q96BH3 223 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 PCMTD1Q96MG8 357 aaPredicted RBP16.68■□□□□ 0.26
CHD3-215ENST00000572750 SLC22A12Q96S37 553 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
CHD3-215ENST00000572750 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 PNPLA8Q9NP80 782 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 IL37Q9NZH6 218 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 TRPM5Q9NZQ8 1165 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 KIAA1257Q9ULG3 409 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 DUSP12Q9UNI6 340 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 COL4A3Q01955 1670 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 TICRRQ7Z2Z1 1910 aa16.68■□□□□ 0.26
CHD3-215ENST00000572750 FAM92AA1XBS5 289 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 ZNF840PA6NDX5 716 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 XPO1O14980 1071 aaKnown RBP16.67■□□□□ 0.26
CHD3-215ENST00000572750 THAP12O43422 761 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 ECI2O75521 394 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 CAVIN2O95810 425 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 CKMP06732 381 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 SETSIPP0DME0 302 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 AVPR1AP37288 418 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 PGFP49763 221 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 SLC8A3P57103 927 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 DRAP1Q14919 205 aaPredicted RBP16.67■□□□□ 0.26
CHD3-215ENST00000572750 PKDCCQ504Y2 493 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 LCLAT1Q6UWP7 414 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 VITQ6UXI7 678 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 MON1AQ86VX9 555 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
CHD3-215ENST00000572750 NXPE3Q969Y0 559 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 TRPV4Q9HBA0 871 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
CHD3-215ENST00000572750 TRAV19A0A0A6YYK7 116 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 HEPACAM2A8MVW5 462 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 F8VZ95 297 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 GOLGA6L19H0YKK7 550 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 FOXN3O00409 490 aaPredicted RBP16.66■□□□□ 0.26
CHD3-215ENST00000572750 TEX33O43247 280 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 KIF11P52732 1056 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 POLR2FP61218 127 aaKnown RBP16.66■□□□□ 0.26
CHD3-215ENST00000572750 TPM4P67936 248 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 STILQ15468 1287 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
CHD3-215ENST00000572750 PDZD8Q8NEN9 1154 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 USP13Q92995 863 aaPredicted RBP16.66■□□□□ 0.26
CHD3-215ENST00000572750 ERGIC2Q96RQ1 377 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 CYP2S1Q96SQ9 504 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 FBXO44Q9H4M3 255 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
CHD3-215ENST00000572750 ZMYM5Q9UJ78 669 aa16.66■□□□□ 0.26
CHD3-215ENST00000572750 CEP250Q9BV73 2442 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 PIK3R2O00459 728 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 OAS1P00973 400 aaKnown RBP16.65■□□□□ 0.26
CHD3-215ENST00000572750 SERPINC1P01008 464 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 CFHP08603 1231 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 SRFP11831 508 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 PLA2G4AP47712 749 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 RGS7P49802 495 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 ADIGQ0VDE8 80 aa16.65■□□□□ 0.26
CHD3-215ENST00000572750 CNGA2Q16280 664 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms