RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 PADI4Q9UM07 663 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 SH2B3Q9UQQ2 575 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 THRAP3Q9Y2W1 955 aaKnown RBP4.29□□□□□ -1.72
CDC27-213ENST00000571643 BCL9LQ86UU0 1499 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 ATRNO75882 1429 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 KIF24Q5T7B8 1368 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 NRKQ7Z2Y5 1582 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 SLIT3O75094 1523 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 E2F8A0AVK6 867 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 LINC01548A6NM66 108 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 EXOC5O00471 708 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 PRC1O43663 620 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 WDHD1O75717 1129 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 KIF20AO95235 890 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 PTMAP06454 111 aaKnown RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 EBLN1P0CF75 366 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 NR2F6P10588 404 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 PIM1P11309 404 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 ITPKBP27987 946 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 MAP2K6P52564 334 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 RHBDL3P58872 404 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 FOXD4Q12950 439 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 OS9Q13438 667 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 LLGL1Q15334 1064 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 AMOTQ4VCS5 1084 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 BRDTQ58F21 947 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 ICE2Q659A1 982 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 WDR53Q7Z5U6 358 aaPredicted RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 CAMKK1Q8N5S9 505 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 RFKQ969G6 155 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 MVB12AQ96EY5 273 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 RPS6KC1Q96S38 1066 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 MAP3K14Q99558 947 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 SENP7Q9BQF6 1050 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 SEMA4CQ9C0C4 833 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 AMBRA1Q9C0C7 1298 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 SLC12A5Q9H2X9 1139 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 SARS2Q9NP81 518 aaKnown RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 ARHGEF3Q9NR81 526 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 DDX56Q9NY93 547 aaKnown RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 FLRT1Q9NZU1 646 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 ANKRD6Q9Y2G4 727 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 PLEKHM1Q9Y4G2 1056 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 CD163L1Q9NR16 1453 aa4.28□□□□□ -1.72
CDC27-213ENST00000571643 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
CDC27-213ENST00000571643 NSD2O96028 1365 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 RHOP08100 348 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 CT47B1P0C2W7 299 aaPredicted RBP4.27□□□□□ -1.73
CDC27-213ENST00000571643 PPIFP30405 207 aaKnown RBP4.27□□□□□ -1.73
CDC27-213ENST00000571643 ALDH9A1P49189 494 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 TBCCQ15814 346 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 EZH2Q15910 746 aaKnown RBP4.27□□□□□ -1.73
CDC27-213ENST00000571643 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
CDC27-213ENST00000571643 SLC29A4Q7RTT9 530 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 AMIGO2Q86SJ2 522 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SH2D3CQ8N5H7 860 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 FAM46DQ8NEK8 389 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 KLHDC4Q8TBB5 520 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
CDC27-213ENST00000571643 ANKS1AQ92625 1134 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SLC35A4Q96G79 324 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SMOC2Q9H3U7 446 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SERTAD4Q9NUC0 356 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 SWAP70Q9UH65 585 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 AGAP1Q9UPQ3 857 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 A0A1W2PP64 1363 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 PLEKHG2Q9H7P9 1386 aa4.27□□□□□ -1.73
CDC27-213ENST00000571643 CGNL1Q0VF96 1302 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 PIK3C2AO00443 1686 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 PLCH1Q4KWH8 1693 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 LMO7Q8WWI1 1683 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 VWC2LB2RUY7 222 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 H3BUI4 141 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 SLC16A3O15427 465 aaKnown RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 VPS4BO75351 444 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 OFD1O75665 1012 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 JTBO76095 146 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 ELFN1P0C7U0 828 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 HSPA5P11021 654 aaKnown RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 CYP2C9P11712 490 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 XRCC6P12956 609 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDC27-213ENST00000571643 CHRM3P20309 590 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 CALRP27797 417 aaKnown RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 VIPR2P41587 438 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 PHKA1P46020 1223 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 KCNJ5P48544 419 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 ATXN1P54253 815 aaKnown RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 NKX6-1P78426 367 aaPredicted RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 GTF2H3Q13889 308 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 IQCB1Q15051 598 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 CCSAPQ6IQ19 270 aaPredicted RBP4.26□□□□□ -1.73
CDC27-213ENST00000571643 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
CDC27-213ENST00000571643 PPP1R3BQ86XI6 285 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms