RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 RRP1BQ14684 758 aaKnown RBP15.88■□□□□ 0.13
CIITA-204ENST00000570546 IRF2BP2Q7Z5L9 587 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 SHCBP1Q8NEM2 672 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 NAT9Q9BTE0 207 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 KIAA1683Q9H0B3 1180 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 CASS4Q9NQ75 786 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 USP20Q9Y2K6 914 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 VTNP04004 478 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 RPL10AP62906 217 aaKnown RBP15.88■□□□□ 0.13
CIITA-204ENST00000570546 CNGA2Q16280 664 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 KIZQ2M2Z5 673 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 IARS2Q9NSE4 1012 aaKnown RBP15.88■□□□□ 0.13
CIITA-204ENST00000570546 ZNF75CPQ92670 426 aaPredicted RBP15.88■□□□□ 0.13
CIITA-204ENST00000570546 BTBD10Q9BSF8 475 aa15.88■□□□□ 0.13
CIITA-204ENST00000570546 ZNF268Q14587 947 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 STRA8Q7Z7C7 330 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 CD274Q9NZQ7 290 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 PMPCBO75439 489 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 PGK2P07205 417 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 SERPINB3P29508 390 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 SOX11P35716 441 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 GEMP55040 296 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 AUHQ13825 339 aaKnown RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 FBXO16Q8IX29 292 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 CLEC4FQ8N1N0 589 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 INPP4AQ96PE3 977 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 WDR18Q9BV38 432 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 KBTBD13C9JR72 458 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 RBAK-RBAKDNI3L0D1 243 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 VWA5AO00534 786 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ADRB2P07550 413 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 GRK2P25098 689 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 PLOD1Q02809 727 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 STX5Q13190 355 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 C6orf10Q5SRN2 563 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 PDPK2PQ6A1A2 396 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ACP6Q9NPH0 428 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ETFBP38117 255 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ALDH5A1P51649 535 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 KCNK10P57789 538 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 IL31Q6EBC2 164 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 GGA2Q9UJY4 613 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 XPO1O14980 1071 aaKnown RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 SKAP2O75563 359 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 CPA3P15088 417 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 MAP4P27816 1152 aaKnown RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 KBTBD12Q3ZCT8 623 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 DUPD1Q68J44 220 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 FAM131BQ86XD5 332 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ETNPPLQ8TBG4 499 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 ART4Q93070 314 aa15.87■□□□□ 0.13
CIITA-204ENST00000570546 OXNAD1Q96HP4 312 aaPredicted RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 DDX50Q9BQ39 737 aaKnown RBP15.87■□□□□ 0.13
CIITA-204ENST00000570546 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 TNPO2O14787 897 aaKnown RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 AP1G2O75843 785 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 MICAL2O94851 1124 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 MTFR1Q15390 333 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ACCSLQ4AC99 568 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ZCWPW2Q504Y3 356 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 METTL7BQ6UX53 244 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
CIITA-204ENST00000570546 CKAP2Q8WWK9 683 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ANKRD27Q96NW4 1050 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ADGRA2Q96PE1 1338 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 PEAK1Q9H792 1746 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 CALCAP01258 141 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ZCCHC18P0CG32 403 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 BTKQ06187 659 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 CYLC2Q14093 348 aaPredicted RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 AGAP9Q5VTM2 703 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 BNC2Q6ZN30 1099 aaPredicted RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 SZRD1Q7Z422 152 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 FAM71AQ8IYT1 594 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 PRELID2Q8N945 189 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 RNF217Q8TC41 542 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 AAR2Q9Y312 384 aaKnown RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 MRC1P22897 1456 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 TADA2AO75478 443 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 DSG3P32926 999 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 MARCKSL1P49006 195 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 MARSP56192 900 aaKnown RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 SEL1L3Q68CR1 1132 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 IZUMO2Q6UXV1 221 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ADGRF2Q8IZF7 708 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 IL1RAPL1Q9NZN1 696 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 FAM198AQ9UFP1 575 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 SYNPO2Q9UMS6 1093 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 C15orf41Q9Y2V0 281 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 FCHO1O14526 889 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ATP9AO75110 1047 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms