RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CETN3O15182 167 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LRP3O75074 770 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CILPO75339 1184 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SMC2O95347 1197 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PRCPP42785 496 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FOXK2Q01167 660 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 GAB4Q2WGN9 574 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LAIR1Q6GTX8 287 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 WDR5BQ86VZ2 330 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CAMKK1Q8N5S9 505 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CCDC150Q8NCX0 1101 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SLC2A14Q8TDB8 520 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ELMO3Q96BJ8 720 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 OTUB2Q96DC9 234 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ZFRQ96KR1 1074 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 MED10Q9BTT4 135 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 DNAI2Q9GZS0 605 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LINC00597Q9H2U6 94 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FBRSL1Q9HCM7 1045 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 C2orf42Q9NWW7 574 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CPQQ9Y646 472 aa18.1■□□□□ 0.49
MAP1LC3B-208ENST00000570189 E2F8A0AVK6 867 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 EGFP01133 1207 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 EPB41P11171 864 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 CCDC130P13994 396 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 EIF2DP41214 584 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 HECTD3Q5T447 861 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FOXR2Q6PJQ5 311 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SMYD4Q8IYR2 804 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 ADGRG2Q8IZP9 1017 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 FBXL13Q8NEE6 735 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 SCAMP5Q8TAC9 235 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 EZH1Q92800 747 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TWNKQ96RR1 684 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 TBC1D14Q9P2M4 693 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 NCDNQ9UBB6 729 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 HOOK1Q9UJC3 728 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 COQ4Q9Y3A0 265 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 PCDHA5Q9Y5H7 936 aa18.09■□□□□ 0.49
MAP1LC3B-208ENST00000570189 HHLA1C9JL84 531 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 COCHO43405 550 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RNF40O75150 1001 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 BEST1O76090 585 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CLSTN1O94985 981 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FAM200BP0CF97 657 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TGM1P22735 817 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 OPRD1P41143 372 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ID4P47928 161 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MXI1P50539 228 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FKBP3Q00688 224 aaKnown RBP18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PKN3Q6P5Z2 889 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CLEC20AQ6ZU45 233 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ERMP1Q7Z2K6 904 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ZNF276Q8N554 614 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 C12orf29Q8N999 325 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SCML2Q9UQR0 700 aa18.08■□□□□ 0.48
MAP1LC3B-208ENST00000570189 A0A0A0MRY4 1105 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HRO43593 1189 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CYP17A1P05093 508 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MBL2P11226 248 aaPredicted RBP18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PPP1R2P41236 205 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FNTBP49356 437 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DMWDQ09019 674 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 KLHDC10Q6PID8 442 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SYT13Q7L8C5 426 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 KIAA2013Q8IYS2 634 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DCLK2Q8N568 766 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SMARCE1Q969G3 411 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ACDQ96AP0 544 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CYFIP2Q96F07 1278 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TSG101Q99816 390 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HINFPQ9BQA5 517 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CYLDQ9NQC7 956 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TLR8Q9NR97 1041 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FAM49BQ9NUQ9 324 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RAB20Q9NX57 234 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GMEB2Q9UKD1 530 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RAB23Q9ULC3 237 aa18.07■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PMM2O15305 246 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RETP07949 1114 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MAP3K7CLP57077 242 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 IFRD2Q12894 506 aaPredicted RBP18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ORC1Q13415 861 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DHCR24Q15392 516 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SEMA4DQ92854 862 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DLL3Q9NYJ7 618 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GMIPQ9P107 970 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CFAP97Q9P2B7 532 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CHORDC1Q9UHD1 332 aaPredicted RBP18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ADH1CP00326 375 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ABL1P00519 1130 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PSEN1P49768 467 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms