RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 CHFRQ96EP1 664 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 HEXIM2Q96MH2 286 aaKnown RBP13.78□□□□□ -0.2
CNOT1-220ENST00000569916 NT5C1BQ96P26 610 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNOT1-220ENST00000569916 F5P12259 2224 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 LEFTY2O00292 366 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 COCHO43405 550 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CACNA1HO95180 2353 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 AFPP02771 609 aaKnown RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CHRNB1P11230 501 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 PGFP49763 221 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 TUBP50607 506 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 MAML2Q8IZL2 1156 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 KAT5Q92993 513 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 DUSP16Q9BY84 665 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CHRDQ9H2X0 955 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 FBXO44Q9H4M3 255 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 DUS2Q9NX74 493 aaKnown RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CHORDC1Q9UHD1 332 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CPQQ9Y646 472 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
CNOT1-220ENST00000569916 CACNA1IQ9P0X4 2223 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 CYP26A1O43174 497 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 ACO1P21399 889 aaKnown RBP13.76□□□□□ -0.21
CNOT1-220ENST00000569916 NBL1P41271 181 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 IFNAR2P48551 515 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 CETN1Q12798 172 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 PON2Q15165 354 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 EML3Q32P44 896 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 ARHGEF19Q8IW93 802 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 PPM1KQ8N3J5 372 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 GPT2Q8TD30 523 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 ZFRQ96KR1 1074 aaKnown RBP13.76□□□□□ -0.21
CNOT1-220ENST00000569916 SPATA6Q9NWH7 488 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-220ENST00000569916 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 SCML2Q9UQR0 700 aa13.76□□□□□ -0.21
CNOT1-220ENST00000569916 MBL2P11226 248 aaPredicted RBP13.75□□□□□ -0.21
CNOT1-220ENST00000569916 KIF11P52732 1056 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 GCNT1Q02742 428 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 DDX42Q86XP3 938 aaKnown RBP eCLIP13.75□□□□□ -0.21
CNOT1-220ENST00000569916 CPA6Q8N4T0 437 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 ANKRD52Q8NB46 1076 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 EHBP1Q8NDI1 1231 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 INTS2Q9H0H0 1204 aaKnown RBP13.75□□□□□ -0.21
CNOT1-220ENST00000569916 LINC00597Q9H2U6 94 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 ECT2Q9H8V3 914 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 NMUR1Q9HB89 426 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
CNOT1-220ENST00000569916 RBM12Q9NTZ6 932 aaKnown RBP13.75□□□□□ -0.21
CNOT1-220ENST00000569916 OSER1Q9NX31 292 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
CNOT1-220ENST00000569916 PROB1E7EW31 1015 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 O00370 1275 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 LAMTOR5O43504 91 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 TLR5O60602 858 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 SP9P0CG40 484 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 VDRP11473 427 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 CD19P15391 556 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 ERCC5P28715 1186 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-220ENST00000569916 GJA4P35212 333 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 MRE11P49959 708 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 BCAT1P54687 386 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 MTAPQ13126 283 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 CCINQ13939 588 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 LRRC32Q14392 662 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 GAS6Q14393 721 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
CNOT1-220ENST00000569916 PIGZQ86VD9 579 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 KREMEN1Q96MU8 473 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 IER2Q9BTL4 223 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-220ENST00000569916 FBXO4Q9UKT5 387 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
CNOT1-220ENST00000569916 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 A0A1W2PQH9 124 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms