RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 EIF2AQ9BY44 585 aaKnown RBP5.64□□□□□ -1.51
SF3B3-213ENST00000569687 FAM49AQ9H0Q0 323 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-213ENST00000569687 UPF3AQ9H1J1 476 aaKnown RBP5.64□□□□□ -1.51
SF3B3-213ENST00000569687 CXCL16Q9H2A7 254 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 CCDC134Q9H6E4 229 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 SYNCQ9H7C4 482 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 PPCSQ9HAB8 311 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 PCDH9Q9HC56 1237 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 GTF2IRD1Q9UHL9 959 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 LGALS13Q9UHV8 139 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 TSPAN16Q9UKR8 245 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 DNPEPQ9ULA0 475 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 ZMYND8Q9ULU4 1186 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-213ENST00000569687 USP18Q9UMW8 372 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF148Q9UQR1 794 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 PTPN22Q9Y2R2 807 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 GPSM3Q9Y4H4 160 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 NME7Q9Y5B8 376 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 SNX9Q9Y5X1 595 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 ANK1P16157 1881 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 EVPLQ92817 2033 aa5.64□□□□□ -1.51
SF3B3-213ENST00000569687 ZSWIM8A7E2V4 1837 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 LRRD1A4D1F6 860 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 C5orf60A6NFR6 353 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 KPNA7A9QM74 516 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 E5RJQ4 531 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 E7EVH7 732 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 EBAG9O00559 213 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ARHGAP33O14559 1287 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 GABRDO14764 452 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 RGS16O15492 202 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PAPSS1O43252 624 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TRAPPC3O43617 180 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CST8O60676 142 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF623O75123 536 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 DKK1O94907 266 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 MYL3P08590 195 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FGFR1P11362 822 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 AKR1A1P14550 325 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PDGFRAP16234 1089 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 WARSP23381 471 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 IL4RP24394 825 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 RPL9P32969 192 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 MAGEA4P43358 317 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ACADSBP45954 432 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ATP1A2P50993 1020 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CDR1P51861 262 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SLC18A1P54219 525 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 LILRA4P59901 499 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 IFI35P80217 286 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CCL14Q16627 93 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 KYNUQ16719 465 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SV2CQ496J9 727 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ZC3H12AQ5D1E8 599 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FAM47CQ5HY64 1035 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FBXO47Q5MNV8 452 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ERMARDQ5T6L9 678 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PPP1R26Q5T8A7 1209 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 RNASEH2BQ5TBB1 312 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 IZUMO3Q5VZ72 239 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 OR6B2Q6IFH4 312 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PMF1Q6P1K2 205 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 OLFML1Q6UWY5 402 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FAM183BPQ6ZVS7 135 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CYP4V2Q6ZWL3 525 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SLC26A9Q7LBE3 791 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 GSTA5Q7RTV2 222 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ACOT1Q86TX2 421 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 LAPTM4BQ86VI4 370 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SESTD1Q86VW0 696 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 NLRP14Q86W24 1093 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TTC30AQ86WT1 665 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TDRPQ86YL5 185 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PSTKQ8IV42 348 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 MAP7D3Q8IWC1 876 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 EMC1Q8N766 993 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 C7orf31Q8N865 590 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 C12orf29Q8N999 325 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 SMG8Q8ND04 991 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TRPV1Q8NER1 839 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ACTL9Q8TC94 416 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 BCAS4Q8TDM0 211 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 KBTBD7Q8WVZ9 684 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TMEM40Q8WWA1 233 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 KCTD13Q8WZ19 329 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 C18orf25Q96B23 403 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 FAF2Q96CS3 445 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CCDC114Q96M63 670 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 ZNF560Q96MR9 790 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 TTC25Q96NG3 672 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 RNF157Q96PX1 679 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 PPP1R10Q96QC0 940 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CCT8L2Q96SF2 557 aa5.63□□□□□ -1.51
SF3B3-213ENST00000569687 HNRNPABQ99729 332 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 C11orf84Q9BUA3 381 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 DDX23Q9BUQ8 820 aaKnown RBP5.63□□□□□ -1.51
SF3B3-213ENST00000569687 CFHR5Q9BXR6 569 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms