RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 DNAJC7Q99615 494 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 SMOQ99835 787 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 CRISPLD1Q9H336 500 aa16.9■□□□□ 0.3
USB1-215ENST00000569252 SLC38A8A6NNN8 435 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 GPR15P49685 360 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 SDHAF4Q5VUM1 108 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 SIX6OS1Q8N1H7 587 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 LEMD2Q8NC56 503 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 GPR152Q8TDT2 470 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 SLC20A1Q8WUM9 679 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 PSMG2Q969U7 264 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 GCNAQ96QF7 691 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 ZSWIM1Q9BR11 485 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 CORO1BQ9BR76 489 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 ASAH2Q9NR71 780 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
USB1-215ENST00000569252 WDR87Q6ZQQ6 2873 aa16.89■□□□□ 0.29
USB1-215ENST00000569252 FAM186AA6NE01 2351 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 ZNF197O14709 1029 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 AKR1B10O60218 316 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 BEST1O76090 585 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 PTMAP06454 111 aaKnown RBP16.88■□□□□ 0.29
USB1-215ENST00000569252 POU2F2P09086 479 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 LCP1P13796 627 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 YWHAQP27348 245 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 GPD2P43304 727 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 NSFP46459 744 aaKnown RBP16.88■□□□□ 0.29
USB1-215ENST00000569252 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 CACNA2D1P54289 1103 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
USB1-215ENST00000569252 ERICH1Q86X53 443 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 KCTD13Q8WZ19 329 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 GOLGA1Q92805 767 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 SLITRK1Q96PX8 696 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 ADAM7Q9H2U9 754 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 CYLDQ9NQC7 956 aa16.88■□□□□ 0.29
USB1-215ENST00000569252 ATF6P18850 670 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 MTHFRP42898 656 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 PPP3CCP48454 512 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 RGS7P49802 495 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 TKTL1P51854 596 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 SLC5A3P53794 718 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 FMO1Q01740 532 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 PKDCCQ504Y2 493 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 ZNF571Q7Z3V5 609 aaPredicted RBP16.87■□□□□ 0.29
USB1-215ENST00000569252 GPR149Q86SP6 731 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
USB1-215ENST00000569252 CPA5Q8WXQ8 436 aa16.87■□□□□ 0.29
USB1-215ENST00000569252 FBXO21O94952 628 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
USB1-215ENST00000569252 ABL1P00519 1130 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 CFHP08603 1231 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 MYL4P12829 197 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 CHRNB2P17787 502 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 EIF4A3P38919 411 aaKnown RBP16.86■□□□□ 0.29
USB1-215ENST00000569252 CDK17Q00537 523 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 NAA35Q5VZE5 725 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 PMF1Q6P1K2 205 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 CCDC186Q7Z3E2 898 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 GRASPQ7Z6J2 395 aaPredicted RBP16.86■□□□□ 0.29
USB1-215ENST00000569252 ARHGAP18Q8N392 663 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 ZMIZ2Q8NF64 920 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 FBXO32Q969P5 355 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 C18orf8Q96DM3 657 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 NECTIN4Q96NY8 510 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 NHEJ1Q9H9Q4 299 aaPredicted RBP16.86■□□□□ 0.29
USB1-215ENST00000569252 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
USB1-215ENST00000569252 SSU72P8A0A1W2PR75 194 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 SART1O43290 800 aaKnown RBP16.85■□□□□ 0.29
USB1-215ENST00000569252 ZBED1O96006 694 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 GZMAP12544 262 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 CDC25CP30307 473 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 CYLC1P35663 651 aaPredicted RBP16.85■□□□□ 0.29
USB1-215ENST00000569252 KIF11P52732 1056 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 PDCLQ13371 301 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms