RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 KCND3Q9UK17 655 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 SLC27A6Q9Y2P4 619 aa6.63□□□□□ -1.35
UBR1-208ENST00000569066 PNMA6EA0A0J9YXQ4 647 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 MYADML2A6NDP7 307 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A18PA6NE21 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A16PA6NEW6 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A9PA6NNJ1 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A5PA8MXJ8 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 E7ENX8 843 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 J3KRW8 73 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 CCNT2O60583 730 aaKnown RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 KRT38O76015 456 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 CER1O95813 267 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 CYP21A2P08686 494 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A15PP0C7V4 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FAM90A14PP0C7W9 464 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 TAP2Q03519 686 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 TRIM71Q2Q1W2 868 aaKnown RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 ABRAQ8N0Z2 381 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 HERVK_113Q902F9 699 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 TRAPPC9Q96Q05 1148 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 WDR24Q96S15 920 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBR1-208ENST00000569066 MECRQ9BV79 373 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 UNKLQ9H9P5 680 aaKnown RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 AKIP1Q9NQ31 210 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 HELLSQ9NRZ9 838 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 ATP1A3P13637 1013 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 GATMP50440 423 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 RESTQ13127 1097 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 TOB2Q14106 344 aaPredicted RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 ANKRD45Q5TZF3 282 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 ICE2Q659A1 982 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 DPY19L3Q6ZPD9 716 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 RASGRP2Q7LDG7 609 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 FSTL5Q8N475 847 aaPredicted RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 ATRIPQ8WXE1 791 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 THAP4Q8WY91 577 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 LPIN2Q92539 896 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 ELAC1Q9H777 363 aaKnown RBP6.62□□□□□ -1.35
UBR1-208ENST00000569066 CD248Q9HCU0 757 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 CA14Q9ULX7 337 aa6.62□□□□□ -1.35
UBR1-208ENST00000569066 ZAR1LA6NP61 321 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 DIRC3C9JPN6 131 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 NR4A1P22736 598 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 RBL1P28749 1068 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 CCR5P51681 352 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 CLCN2P51788 898 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 PDCLQ13371 301 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
UBR1-208ENST00000569066 MZT2AQ6P582 158 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 NAXEQ8NCW5 288 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 FAM136AQ96C01 138 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 COG8Q96MW5 612 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 SMC4Q9NTJ3 1288 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 TERF2IPQ9NYB0 399 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
UBR1-208ENST00000569066 NDUFA10O95299 355 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 MAGEA10P43363 369 aaPredicted RBP6.61□□□□□ -1.35
UBR1-208ENST00000569066 P3H1Q32P28 736 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 BEAN1Q3B7T3 259 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 RABL3Q5HYI8 236 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 MSANTD2Q6P1R3 559 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 CLEC4GQ6UXB4 293 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 MAVSQ7Z434 540 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 MBD3L2Q8NHZ7 208 aaPredicted RBP6.61□□□□□ -1.35
UBR1-208ENST00000569066 SUN3Q8TAQ9 357 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 OSCP1Q8WVF1 389 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 C3orf49Q96BT1 292 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 FAM89AQ96GI7 184 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 BRD8Q9H0E9 1235 aa6.61□□□□□ -1.35
UBR1-208ENST00000569066 TRIAP1O43715 76 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 FAM163BP0C2L3 166 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 PRKAR1BP31321 381 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 PBX1P40424 430 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 LIFRP42702 1097 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 PDE6CP51160 858 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 TIAL1Q01085 375 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBR1-208ENST00000569066 GALNTL6Q49A17 601 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 TTC22Q5TAA0 569 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 PIK3AP1Q6ZUJ8 805 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 IZUMO1Q8IYV9 350 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 CPEB3Q8NE35 698 aaKnown RBP6.6□□□□□ -1.35
UBR1-208ENST00000569066 SUPT20HQ8NEM7 779 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 ABHD5Q8WTS1 349 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 SKA1Q96BD8 255 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 ANP32EQ9BTT0 268 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 AMBRA1Q9C0C7 1298 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 SPATA31A3Q5VYP0 1347 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 M0QYT0 321 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 EXOC5O00471 708 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 TRIM24O15164 1050 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 LPXNO60711 386 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 MBD4O95243 580 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 CD4P01730 458 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 VAV2P52735 878 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 ADCK5Q3MIX3 580 aa6.6□□□□□ -1.35
UBR1-208ENST00000569066 TMEM196Q5HYL7 178 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms