RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GRIN1Q05586 938 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 SCAPQ12770 1279 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 TAF10Q12962 218 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ACACAQ13085 2346 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 SLC14A1Q13336 389 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 LY6G5CQ5SRR4 150 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 TDRD10Q5VZ19 366 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 LIMS2Q7Z4I7 341 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ETFBKMTQ8IXQ9 262 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 PHTF2Q8N3S3 785 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 DEFB119Q8N690 84 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ZNF513Q8N8E2 541 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 MYCBPAPQ8TBZ2 947 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 ANKRD36BP1Q96IX9 119 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 PDE11AQ9HCR9 933 aa12.58□□□□□ -0.4
GTF3C1-209ENST00000568569 PTPRDP23468 1912 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 IGHV1OR15-9A0A0B4J2B8 117 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 GOLGA8JA6NMD2 632 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 HOXC11O43248 304 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 ZNF217O75362 1048 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 GAP43P17677 238 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 WARSP23381 471 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 ALCAMQ13740 583 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 TRIP6Q15654 476 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 PDZD3Q86UT5 571 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 OR2I1PQ8NGU4 316 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 NOC3LQ8WTT2 800 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 TBC1D7Q9P0N9 293 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 APC2O95996 2303 aa12.57□□□□□ -0.4
GTF3C1-209ENST00000568569 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 SH3BP5O60239 455 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 TULP3O75386 442 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 TNNC2P02585 160 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 NTSR1P30989 418 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 C10orf76Q5T2E6 689 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 SLC41A1Q8IVJ1 513 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 NAXDQ8IW45 347 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 GPD1LQ8N335 351 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 NAT16Q8N8M0 369 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 TRIML1Q8N9V2 468 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 TERB1Q8NA31 727 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 PDZD8Q8NEN9 1154 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 CAMK1GQ96NX5 476 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 ELOVL4Q9GZR5 314 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 FAM124BQ9H5Z6 455 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 SUSD2Q9UGT4 822 aa12.56□□□□□ -0.4
GTF3C1-209ENST00000568569 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 A0A1W2PQF6 199 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 KIAA0391O15091 583 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 COCHO43405 550 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 GJB3O75712 270 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 GNSP15586 552 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 CASP5P51878 434 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SURF1Q15526 300 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 DUOXA2Q1HG44 320 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 ANO4Q32M45 955 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 PLEKHG6Q3KR16 790 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SYCP2LQ5T4T6 812 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SDE2Q6IQ49 451 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 CCNI2Q6ZMN8 369 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 RGL4Q8IZJ4 473 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 OR5B17Q8NGF7 314 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 KIF2CQ99661 725 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 CYP8B1Q9UNU6 501 aa12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 APOBEC2Q9Y235 224 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-209ENST00000568569 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms