RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 SGF29Q96ES7 293 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 TMEM79Q9BSE2 394 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
PALB2-206ENST00000568219 A0A0B4J269 797 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ABHD2P08910 425 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 SHMT1P34896 483 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ETFBP38117 255 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
PALB2-206ENST00000568219 PCYT1AP49585 367 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 RGS7P49802 495 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 NAA20P61599 178 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 CBX3Q13185 183 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 GIPC3Q8TF64 312 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 MARK4Q96L34 752 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 TARS2Q9BW92 718 aaKnown RBP11.31□□□□□ -0.6
PALB2-206ENST00000568219 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ACSS3Q9H6R3 686 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 RRN3Q9NYV6 651 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ZNF180Q9UJW8 692 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
PALB2-206ENST00000568219 AP4B1Q9Y6B7 739 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 COMMD10Q9Y6G5 202 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
PALB2-206ENST00000568219 SLC1A6P48664 564 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PSMD7P51665 324 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 TFDP2Q14188 446 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 SPDYAQ5MJ70 313 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PLEKHA7Q6IQ23 1121 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PTF1AQ7RTS3 328 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 CCDC138Q96M89 665 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 WRNIP1Q96S55 665 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 RNPEPQ9H4A4 650 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 PNPOQ9NVS9 261 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
PALB2-206ENST00000568219 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ADCY6O43306 1168 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ATP9BO43861 1147 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 KDM1AO60341 852 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TOP3BO95985 862 aaKnown RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 CFHP08603 1231 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 MAP4P27816 1152 aaKnown RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 DSG3P32926 999 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 CUL2Q13617 745 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 PIGHQ14442 188 aaPredicted RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 TRIM72Q6ZMU5 477 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ACAD11Q709F0 780 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 SLITRK1Q96PX8 696 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 NFAT5O94916 1531 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 SERPINB2P05120 415 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 MLH1P40692 756 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 GLRBP48167 497 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 RARRES1P49788 294 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 INHBEP58166 350 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 RHBDL3P58872 404 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ACTR3P61158 418 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 FSTL1Q12841 308 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 BMT2Q1RMZ1 405 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TNNC2P02585 160 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 CCNG1P51959 295 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 GDF10P55107 478 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 SNX32Q86XE0 403 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 STKLD1Q8NE28 680 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 DDHD1Q8NEL9 900 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 UBA3Q8TBC4 463 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 PIWIL2Q8TC59 973 aaKnown RBP11.3□□□□□ -0.6
PALB2-206ENST00000568219 CCDC90BQ9GZT6 254 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
PALB2-206ENST00000568219 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
PALB2-206ENST00000568219 ZNF699Q32M78 642 aa11.29□□□□□ -0.6
PALB2-206ENST00000568219 NADK2Q4G0N4 442 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms