RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PPP3CAQ08209 521 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 ADAM9Q13443 819 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 EDRF1Q3B7T1 1238 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 FAM186BQ8IYM0 893 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 ZMIZ2Q8NF64 920 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 GAB3Q8WWW8 586 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 ZFRQ96KR1 1074 aaKnown RBP15.1■□□□□ 0.01
COMMD4-216ENST00000567023 SMOQ99835 787 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 CYP3A43Q9HB55 503 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 TBC1D14Q9P2M4 693 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 ATG2BQ96BY7 2078 aa15.1■□□□□ 0.01
COMMD4-216ENST00000567023 LAMA1P25391 3075 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 A0A0A0MRY4 1105 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 E2F8A0AVK6 867 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 K7EQS6 105 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 COCHO43405 550 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 BEST1O76090 585 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 CLSTN1O94985 981 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 KRT13P13646 458 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 GTF2H1P32780 548 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 SPEM2Q0P670 501 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 IFRD2Q12894 506 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-216ENST00000567023 DHCR24Q15392 516 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 HECTD3Q5T447 861 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 FAM160A2Q8N612 972 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-216ENST00000567023 C12orf29Q8N999 325 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 RPLP0P6Q8NHW5 317 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 SLC2A14Q8TDB8 520 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 TAS1R2Q8TE23 839 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 ACDQ96AP0 544 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 OTUB2Q96DC9 234 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 LOXL4Q96JB6 756 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 HNRNPABQ99729 332 aaKnown RBP15.09■□□□□ 0.01
COMMD4-216ENST00000567023 IMPG2Q9BZV3 1241 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 FBXO44Q9H4M3 255 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 TMEM8AQ9HCN3 771 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 KRT82Q9NSB4 513 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 SMPD4Q9NXE4 827 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 HMGXB4Q9UGU5 601 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 EBF1Q9UH73 591 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 USP18Q9UMW8 372 aa15.09■□□□□ 0.01
COMMD4-216ENST00000567023 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 RPP40O75818 363 aaKnown RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 CYP17A1P05093 508 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 TRIM49P0CI25 452 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 TRIM49CP0CI26 452 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 MBL2P11226 248 aaPredicted RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 CCDC130P13994 396 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 GCLMP48507 274 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 CSRP2Q16527 193 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 COBLL1Q53SF7 1204 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 RHBDF2Q6PJF5 856 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 CEP68Q76N32 757 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 CACNA2D4Q7Z3S7 1137 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 FMR1NBQ8N0W7 255 aaPredicted RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 ZC3H10Q96K80 434 aaKnown RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 NT5C1AQ9BXI3 368 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 APOBEC3GQ9HC16 384 aaKnown RBP15.08■□□□□ 0
COMMD4-216ENST00000567023 PNPLA8Q9NP80 782 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 SEMA4GQ9NTN9 838 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 CFAP97Q9P2B7 532 aa15.08■□□□□ 0
COMMD4-216ENST00000567023 FAM200BP0CF97 657 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 PXNP49023 591 aaPredicted RBP15.07■□□□□ 0
COMMD4-216ENST00000567023 ATXN1P54253 815 aaKnown RBP15.07■□□□□ 0
COMMD4-216ENST00000567023 MAP3K7CLP57077 242 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 ORC1Q13415 861 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 DMC1Q14565 340 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 KRT39Q6A163 491 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 CLEC20AQ6ZU45 233 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 SPATA20Q8TB22 786 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 USP33Q8TEY7 942 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 WHAMMQ8TF30 809 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 CYFIP2Q96F07 1278 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 GSDMAQ96QA5 445 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 TWNKQ96RR1 684 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 NIF3L1Q9GZT8 377 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 FAM124BQ9H5Z6 455 aaPredicted RBP15.07■□□□□ 0
COMMD4-216ENST00000567023 CCSER2Q9H7U1 834 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 TLR8Q9NR97 1041 aaKnown RBP15.07■□□□□ 0
COMMD4-216ENST00000567023 POLR3BQ9NW08 1133 aaPredicted RBP15.07■□□□□ 0
COMMD4-216ENST00000567023 GMIPQ9P107 970 aa15.07■□□□□ 0
COMMD4-216ENST00000567023 MYO16Q9Y6X6 1858 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 HHLA1C9JL84 531 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 AXIN1O15169 862 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 CILPO75339 1184 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 APBB3O95704 486 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 ADH1CP00326 375 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 PGFP49763 221 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 MRPS21P82921 87 aaKnown RBP15.06■□□□□ 0
COMMD4-216ENST00000567023 PRR23CQ6ZRP0 262 aa15.06■□□□□ 0
COMMD4-216ENST00000567023 CCDC150Q8NCX0 1101 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms