RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 JOSD2Q8TAC2 188 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-213ENST00000566756 MCRS1Q96EZ8 462 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 APBA2Q99767 749 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 VRTNQ9H8Y1 702 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
CMTM3-213ENST00000566756 ANK1P16157 1881 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 MCF2LO15068 1137 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ENDOD1O94919 500 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 IL1BP01584 269 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 TROVE2P10155 538 aaKnown RBP eCLIP17.5■□□□□ 0.39
CMTM3-213ENST00000566756 GDF10P55107 478 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ACCSLQ4AC99 568 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ZNF667Q5HYK9 610 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ANKRD22Q5VYY1 191 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 SLC4A11Q8NBS3 891 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 NSMCE1Q8WV22 266 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 DCAKDQ8WVC6 231 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 UTP4Q969X6 686 aaKnown RBP17.5■□□□□ 0.39
CMTM3-213ENST00000566756 CYTH2Q99418 400 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 TUBB6Q9BUF5 446 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ZWILCHQ9H900 591 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 CYP3A43Q9HB55 503 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 LNPEPQ9UIQ6 1025 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 ABT1Q9ULW3 272 aaKnown RBP17.5■□□□□ 0.39
CMTM3-213ENST00000566756 STK38LQ9Y2H1 464 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 Q9Y3F1 56 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 L3MBTL1Q9Y468 752 aa17.5■□□□□ 0.39
CMTM3-213ENST00000566756 GOLGA8SH3BPF8 625 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 RNF8O76064 485 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 CD19P15391 556 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 SSTR1P30872 391 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 ATICP31939 592 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 RAD23BP54727 409 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 SEPT7Q16181 437 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 MSS51Q4VC12 460 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 ATF7IP2Q5U623 682 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 CHSY1Q86X52 802 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 PALM2Q8IXS6 379 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 SPOCK2Q92563 424 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 TLE6Q9H808 572 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 ASNSD1Q9NWL6 643 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 CYTH4Q9UIA0 394 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 TRIM33Q9UPN9 1127 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 TNFSF13BQ9Y275 285 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 IQANK1A0A1B0GTG1 560 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 TRUB2O95900 331 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 ALDH1A1P00352 501 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 CLCN3P51790 818 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 EIF3EP60228 445 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 FAM47CQ5HY64 1035 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 KCTD6Q8NC69 237 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 WDR83Q9BRX9 315 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 MIS12Q9H081 205 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 PNPLA8Q9NP80 782 aa17.49■□□□□ 0.39
CMTM3-213ENST00000566756 XPO7Q9UIA9 1087 aaKnown RBP17.49■□□□□ 0.39
CMTM3-213ENST00000566756 GOLGA8MH3BSY2 632 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 TMEM63AO94886 807 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 TGDSO95455 350 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 DHRS4L1P0CG22 281 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 T-ENOLP0DO92 83 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 DYNLT1P63172 113 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 DPYSL3Q14195 570 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 FAM187BQ17R55 369 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 WASHC2DQ5SRD0 308 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 PRAMEF19Q5SWL8 479 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 MTHFD1LQ6UB35 978 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 CAPN12Q6ZSI9 719 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 SLC7A6OSQ96CW6 309 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 METTL5Q9NRN9 209 aaKnown RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 RRN3P2A6NIE6 340 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 CHADO15335 359 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 KIF1CO43896 1103 aaKnown RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 HMGCRP04035 888 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 ERBB2P04626 1255 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 RBP3P10745 1247 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 CYP2B6P20813 491 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 MIPP30301 263 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 IGBP1P78318 339 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 PTPN11Q06124 597 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 TFDP2Q14188 446 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 NOMO1Q15155 1222 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 SMTNL2Q2TAL5 461 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 NLRP9Q7RTR0 991 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 UNC45BQ8IWX7 931 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 APBB2Q92870 758 aa17.48■□□□□ 0.39
CMTM3-213ENST00000566756 RPF1Q9H9Y2 349 aaKnown RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 SAE1Q9UBE0 346 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-213ENST00000566756 USP18Q9UMW8 372 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms