RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 GPR149Q86SP6 731 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 OR8K1Q8NGG5 319 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 ZNF512Q96ME7 567 aaPredicted RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 CORO1BQ9BR76 489 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ADAM7Q9H2U9 754 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 HAUS4Q9H6D7 363 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 LRRC4Q9HBW1 653 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 ZNHIT6Q9NWK9 470 aaKnown RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 MAGED2Q9UNF1 606 aaPredicted RBP12.1□□□□□ -0.47
KARS-207ENST00000566560 COG5Q9UP83 839 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 CLUHO75153 1309 aa12.1□□□□□ -0.47
KARS-207ENST00000566560 RTN3O95197 1032 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 SERPING1P05155 500 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 RHOP08100 348 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 SKILP12757 684 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 CHRNB2P17787 502 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 HNRNPH3P31942 346 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 GPD2P43304 727 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 USP46P62068 366 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 NOMO3P69849 1222 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 NAA35Q5VZE5 725 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 HGSNATQ68CP4 663 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 VPS36Q86VN1 386 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 TMC8Q8IU68 726 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 SIX6OS1Q8N1H7 587 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 TC2NQ8N9U0 490 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 IPO4Q8TEX9 1081 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 FBXO32Q969P5 355 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 NOX5Q96PH1 765 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 GCNAQ96QF7 691 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 AGPAT1Q99943 283 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 SYT11Q9BT88 431 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 S1PR5Q9H228 398 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 LHX5Q9H2C1 402 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 ZNF334Q9HCZ1 680 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 ST7Q9NRC1 585 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 EHD2Q9NZN4 543 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 DNMT3BQ9UBC3 853 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 UXTQ9UBK9 157 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 USP15Q9Y4E8 981 aaPredicted RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 BZW2Q9Y6E2 419 aaKnown RBP12.09□□□□□ -0.47
KARS-207ENST00000566560 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
KARS-207ENST00000566560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.08□□□□□ -0.48
KARS-207ENST00000566560 FAM170AA1A519 330 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 TNFRSF10BO14763 440 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 PLEKP08567 350 aaPredicted RBP12.08□□□□□ -0.48
KARS-207ENST00000566560 MYL4P12829 197 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 HMGA1P17096 107 aaKnown RBP12.08□□□□□ -0.48
KARS-207ENST00000566560 PTPN2P17706 415 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 YWHAQP27348 245 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 CDH5P33151 784 aaPredicted RBP12.08□□□□□ -0.48
KARS-207ENST00000566560 MTHFRP42898 656 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 TKTL1P51854 596 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 EPHA5P54756 1037 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 NTHL1P78549 312 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 ATAT1Q5SQI0 421 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
KARS-207ENST00000566560 MSANTD4Q8NCY6 345 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 SCAMP5Q8TAC9 235 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 OLIG1Q8TAK6 271 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 WNT2BQ93097 391 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 SLITRK1Q96PX8 696 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 TTLL2Q9BWV7 592 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 SYNCQ9H7C4 482 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 THEGQ9P2T0 379 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 CYTH4Q9UIA0 394 aa12.08□□□□□ -0.48
KARS-207ENST00000566560 DOCK8Q8NF50 2099 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 E5RJQ4 531 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 PIK3R2O00459 728 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 TADA3O75528 432 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 FGF19O95750 216 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 CYP1A1P04798 512 aaPredicted RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 LCP1P13796 627 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 CD46P15529 392 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms