RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 XPO1O14980 1071 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 TADA3O75528 432 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 F11P03951 625 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 LAMP2P13473 410 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 CLCN1P35523 988 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 SOX5P35711 763 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 STAT1P42224 750 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 RGS7P49802 495 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 BPIFB4P59827 614 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 TAF10Q12962 218 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 TAF3Q5VWG9 929 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 DENND1BQ6P3S1 775 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 SLC47A2Q86VL8 602 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 ZDHHC14Q8IZN3 488 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 ZNF606Q8WXB4 792 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 ANP32EQ9BTT0 268 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 FBXO44Q9H4M3 255 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 LRRC4Q9HBW1 653 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 GMIPQ9P107 970 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 LIMD1Q9UGP4 676 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 ZFP37Q9Y6Q3 630 aaPredicted RBP17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 DOCK8Q8NF50 2099 aa17.24■□□□□ 0.35
SCAMP2-208ENST00000566557 DENND4CQ5VZ89 1909 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 HHLA1C9JL84 531 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 KRT9P35527 623 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 ARID5AQ03989 594 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 ERMP1Q7Z2K6 904 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 MAB21L3Q8N8X9 362 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 TTC16Q8NEE8 873 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 PDZD8Q8NEN9 1154 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 ZSCAN18Q8TBC5 510 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 GDE1Q9NZC3 331 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 EPS15L1Q9UBC2 864 aa17.23■□□□□ 0.35
SCAMP2-208ENST00000566557 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 PIK3R2O00459 728 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 ASGR2P07307 311 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 CFHP08603 1231 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 LCP1P13796 627 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 CYP11B1P15538 503 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 TKTL1P51854 596 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 JAM2P57087 298 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 ADIGQ0VDE8 80 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 ZSWIM3Q96MP5 696 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 KXD1Q9BQD3 176 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
SCAMP2-208ENST00000566557 TRAV19A0A0A6YYK7 116 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 FAM170AA1A519 330 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 GALR2O43603 387 aaPredicted RBP17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 CKMP06732 381 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 DDX6P26196 483 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 AVPR1AP37288 418 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 KIF11P52732 1056 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 NUBP1P53384 320 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 PKDCCQ504Y2 493 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 FAM78AQ5JUQ0 283 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 SMYD5Q6GMV2 418 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 PARM1Q6UWI2 310 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 RSAD2Q8WXG1 361 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 ULBP1Q9BZM6 244 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 TLR8Q9NR97 1041 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 NUMBLQ9Y6R0 609 aa17.21■□□□□ 0.35
SCAMP2-208ENST00000566557 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 PRR23AA6NEV1 266 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 LRRC53A6NM62 1247 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 DPYSL4O14531 572 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 ID4P47928 161 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 PPP3CCP48454 512 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 HTR4Q13639 388 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 POTEHQ6S545 545 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 NOP9Q86U38 636 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 C1orf131Q8NDD1 294 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 EPS8L1Q8TE68 723 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 SLC20A1Q8WUM9 679 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 CPLX3Q8WVH0 158 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 FGF14Q92915 247 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 SMARCD2Q92925 531 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 NACA2Q9H009 215 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 MIS12Q9H081 205 aa17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 SMG9Q9H0W8 520 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-208ENST00000566557 SEPT11Q9NVA2 429 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms