RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SMPD4Q9NXE4 827 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 CDH9Q9ULB4 789 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-214ENST00000566230 NEUROG3Q9Y4Z2 214 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 NME7Q9Y5B8 376 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 CPQQ9Y646 472 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
COMMD4-214ENST00000566230 ATXN2Q99700 1313 aaKnown RBP14.27□□□□□ -0.12
COMMD4-214ENST00000566230 A0A087X0B3 334 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.13
COMMD4-214ENST00000566230 OAS1P00973 400 aaKnown RBP14.27□□□□□ -0.13
COMMD4-214ENST00000566230 GAP43P17677 238 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 ITPKAP23677 461 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 RING1Q06587 406 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 E2F4Q16254 413 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-214ENST00000566230 SLC23A3Q6PIS1 610 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 PHTF2Q8N3S3 785 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 OR5B17Q8NGF7 314 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 HPDLQ96IR7 371 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 SLC32A1Q9H598 525 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 MAGEF1Q9HAY2 307 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 FSCN3Q9NQT6 498 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 TMEM30AQ9NV96 361 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 INTS13Q9NVM9 706 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 CFAP97Q9P2B7 532 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 MSRB2Q9Y3D2 182 aa14.27□□□□□ -0.13
COMMD4-214ENST00000566230 FREM2Q5SZK8 3169 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 UPK3BL1B0FP48 263 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 UPK3BL2E5RIL1 263 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 GCNT3O95395 438 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 APODP05090 189 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 TMEM191BP0C7N4 346 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 EIF2DP41214 584 aaKnown RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 CACNA2D1P54289 1103 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 FAM193AP78312 1265 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 CYP27A1Q02318 531 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 KDSRQ06136 332 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 SPDYCQ5MJ68 293 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 EOGTQ5NDL2 527 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 HMGB4Q8WW32 186 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 POLMQ9NP87 494 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 ARHGEF4Q9NR80 690 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 BCCIPQ9P287 314 aaKnown RBP eCLIP14.26□□□□□ -0.13
COMMD4-214ENST00000566230 USP25Q9UHP3 1055 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 PCDHB13Q9Y5F0 798 aa14.26□□□□□ -0.13
COMMD4-214ENST00000566230 ADAMTS20P59510 1910 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 A0A1W2PQ27 194 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 A0A1W2PQ64 194 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 A0A1W2PQD8 194 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 TCRBV21S2A2A0A5A6 115 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 F8VP50 259 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 TAF4O00268 1085 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 SLC9A3R1O14745 358 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-214ENST00000566230 ABL1P00519 1130 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 CAPNS1P04632 268 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 ANXA13P27216 316 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 GRIA2P42262 883 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 TNFRSF4P43489 277 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 PPP3CCP48454 512 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 SIM1P81133 766 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-214ENST00000566230 TAF10Q12962 218 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 MYO1EQ12965 1108 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
COMMD4-214ENST00000566230 MDH1BQ5I0G3 518 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 LY6G5CQ5SRR4 150 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 LYSMD4Q5XG99 296 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 CNNM4Q6P4Q7 775 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 GPD1LQ8N335 351 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 DEFB119Q8N690 84 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 DHX58Q96C10 678 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 MRPL45Q9BRJ2 306 aaKnown RBP14.25□□□□□ -0.13
COMMD4-214ENST00000566230 CAPN10Q9HC96 672 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 HCN2Q9UL51 889 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 SLC6A14Q9UN76 642 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 LHX6Q9UPM6 363 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 LAMA5O15230 3695 aa14.25□□□□□ -0.13
COMMD4-214ENST00000566230 GCN1Q92616 2671 aaKnown RBP14.24□□□□□ -0.13
COMMD4-214ENST00000566230 ACACAQ13085 2346 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 PLXNB3Q9ULL4 1909 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
COMMD4-214ENST00000566230 FAM221BA6H8Z2 402 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms