RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SPDYCQ5MJ68 293 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 NUP93Q8N1F7 819 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 PHTF2Q8N3S3 785 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 ZNF507Q8TCN5 953 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 OVCA2Q8WZ82 227 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 OTUB2Q96DC9 234 aa14.99□□□□□ -0.01
CDR2-204ENST00000564542 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDR2-204ENST00000564542 SPEGQ15772 3267 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 A8MXQ7 604 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 ADAM23O75077 832 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 YWHAQP27348 245 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 DPP6P42658 865 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 TNFRSF4P43489 277 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 SNRPFP62306 86 aaKnown RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 ASIC1P78348 528 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 AMPD3Q01432 767 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 BYSLQ13895 437 aaKnown RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 FAM26FQ5R3K3 315 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 CNNM4Q6P4Q7 775 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 RDH13Q8NBN7 331 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 RLN3Q8WXF3 142 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 FBXO32Q969P5 355 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 CCDC127Q96BQ5 260 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 ZFRQ96KR1 1074 aaKnown RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 DUSP9Q99956 384 aaKnown RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 NUSAP1Q9BXS6 441 aaKnown RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 B3GNT5Q9BYG0 378 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 ZSCAN16Q9H4T2 348 aaPredicted RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 MBD1Q9UIS9 605 aaPredicted RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
CDR2-204ENST00000564542 MTMR6Q9Y217 621 aa14.98□□□□□ -0.01
CDR2-204ENST00000564542 ATP8B3O60423 1300 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 WDFY3Q8IZQ1 3526 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 IGF2RP11717 2491 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 TCRBV21S2A2A0A5A6 115 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 CLDN5O00501 218 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 MAP3K13O43283 966 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 COCHO43405 550 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 ATICP31939 592 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 PTGER3P43115 390 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 TUBP50607 506 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 CYP2J2P51589 502 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 GAD2Q05329 585 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 TRPC3Q13507 836 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 STK38Q15208 465 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 MAP7D1Q3KQU3 841 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 UAP1L1Q3KQV9 507 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 LY6G5CQ5SRR4 150 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 EMC10Q5UCC4 262 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 SNX30Q5VWJ9 437 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 ARMCX6Q7L4S7 300 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 SYT12Q8IV01 421 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 ETFBKMTQ8IXQ9 262 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 TMEFF1Q8IYR6 380 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 KDF1Q8NAX2 398 aaPredicted RBP14.97□□□□□ -0.01
CDR2-204ENST00000564542 XXYLT1Q8NBI6 393 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 LINC00301Q8NCQ3 95 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 KCNV2Q8TDN2 545 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 SCFD1Q8WVM8 642 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 HMGB4Q8WW32 186 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
CDR2-204ENST00000564542 TMEM121BQ9BXQ6 578 aaPredicted RBP14.97□□□□□ -0.01
CDR2-204ENST00000564542 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 GZF1Q9H116 711 aaPredicted RBP14.97□□□□□ -0.01
CDR2-204ENST00000564542 XYLT2Q9H1B5 865 aa14.97□□□□□ -0.01
CDR2-204ENST00000564542 NXF1Q9UBU9 619 aaKnown RBP14.97□□□□□ -0.01
CDR2-204ENST00000564542 FAM208BQ5VWN6 2430 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 MYOFQ9NZM1 2061 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 AKAP13Q12802 2813 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 CLIC2O15247 247 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 HOXC11O43248 304 aaPredicted RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 HOXD12P35452 270 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 MYL6P60660 151 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 EHHADHQ08426 723 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 PREPLQ4J6C6 727 aaPredicted RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 HECTD3Q5T447 861 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 BTBD8Q5XKL5 378 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 SLC23A3Q6PIS1 610 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 TRMT11Q7Z4G4 463 aaKnown RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 FAM35AQ86V20 835 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 FRMD1Q8N878 549 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 DEFB124Q8NES8 71 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 ZNF516Q92618 1163 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 DHX58Q96C10 678 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 INTS4Q96HW7 963 aaKnown RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 KCNK16Q96T55 309 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 VRTNQ9H8Y1 702 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 DMAP1Q9NPF5 467 aaPredicted RBP14.96□□□□□ -0.01
CDR2-204ENST00000564542 ZDHHC4Q9NPG8 344 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 TMEM74BQ9NUR3 256 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 PILRBQ9UKJ0 227 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 ZMIZ1Q9ULJ6 1067 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 SH3BP1Q9Y3L3 701 aa14.96□□□□□ -0.01
CDR2-204ENST00000564542 ATXN2Q99700 1313 aaKnown RBP14.95□□□□□ -0.02
CDR2-204ENST00000564542 TMEM8BA6NDV4 472 aa14.95□□□□□ -0.02
CDR2-204ENST00000564542 SPTLC2O15270 562 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms