RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SEPSECSQ9HD40 501 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 RXFP3Q9NSD7 469 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 NDUFAF4Q9P032 175 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 PPP4R1LQ9P1A2 415 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 PI4KBQ9UBF8 816 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 NRBP1Q9UHY1 535 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 KCNE5Q9UJ90 142 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 NFU1Q9UMS0 254 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 SSX2IPQ9Y2D8 614 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 NPIPB6E9PJ23 425 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TRIM24O15164 1050 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TAF5LO75529 589 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RNASEH2AO75792 299 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 BAIAP3O94812 1187 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 ELANEP08246 267 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RNASE9P60153 205 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 PDCD4Q53EL6 469 aaKnown RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 CERCAMQ5T4B2 595 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 ARHGAP40Q5TG30 622 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 SPOCD1Q6ZMY3 1216 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RRAGAQ7L523 313 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 CLNKQ7Z7G1 428 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TRABD2AQ86V40 505 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 CSGALNACT1Q8TDX6 532 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 RFFLQ8WZ73 363 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 GNRHR2Q96P88 292 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 HIST1H2AAQ96QV6 131 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 MNTQ99583 582 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 SLC38A3Q99624 504 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 AGXT2Q9BYV1 514 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 GBA2Q9HCG7 927 aaPredicted RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 BLOC1S4Q9NUP1 217 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 TMEM74BQ9NUR3 256 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 DERAQ9Y315 318 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 USP15Q9Y4E8 981 aaPredicted RBP2.95□□□□□ -1.94
CHD9-209ENST00000564255 ADAMTS20P59510 1910 aa2.95□□□□□ -1.94
CHD9-209ENST00000564255 PRAMEF33A0A0G2JMD5 474 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ZAR1LA6NP61 321 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RGS10O43665 173 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 PRAMEF10O60809 474 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 CFIP05156 583 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 IFIT1P09914 478 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 HGFP14210 728 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 APOBEC3AP31941 199 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 NPTX2P47972 431 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 NDUFV1P49821 464 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 PGDP52209 483 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ADAM17P78536 824 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MAPK7Q13164 816 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ACOX1Q15067 660 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 BTBD16Q32M84 506 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ICE2Q659A1 982 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 B3GNTL1Q67FW5 361 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 RGS7BPQ6MZT1 257 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 TCTN3Q6NUS6 607 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 CFAP161Q6P656 301 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 SLC15A3Q8IY34 581 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ADGRG5Q8IZF4 528 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ABRAQ8N0Z2 381 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TMEM132CQ8N3T6 1108 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MB21D1Q8N884 522 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 USP38Q8NB14 1042 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 GRAMD1AQ96CP6 724 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ZSWIM1Q9BR11 485 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 AMBRA1Q9C0C7 1298 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TAF1DQ9H5J8 278 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 ELAC1Q9H777 363 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 PREBQ9HCU5 417 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RIMKLBQ9ULI2 386 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 DUSP10Q9Y6W6 482 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MARCH11A6NNE9 402 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ZNF185O15231 689 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 FOXS1O43638 330 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RPP40O75818 363 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 GPANK1O95872 356 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ATP1A3P13637 1013 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 EPHA3P29320 983 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RAP1GAPP47736 663 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 XDHP47989 1333 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MAN2A2P49641 1150 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 HSD11B2P80365 405 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MTAPQ13126 283 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 DLGAP5Q15398 846 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 CYP2A13Q16696 494 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 GALNTL6Q49A17 601 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MCTP1Q6DN14 999 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 MSANTD2Q6P1R3 559 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 NEK10Q6ZWH5 1172 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 BRINP3Q76B58 766 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 POU5F2Q8N7G0 328 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 SNRNP27Q8WVK2 155 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 CENPIQ92674 756 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 FUBP1Q96AE4 644 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 NACC2Q96BF6 587 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 HVCN1Q96D96 273 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ZBTB10Q96DT7 871 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TTPALQ9BTX7 342 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 SSBP3Q9BWW4 388 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 TMX4Q9H1E5 349 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 NOD2Q9HC29 1040 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms