RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 GRIN1Q05586 938 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 RHBDF2Q6PJF5 856 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 TRMT11Q7Z4G4 463 aaKnown RBP17.02■□□□□ 0.32
RNF40-205ENST00000563909 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.32
RNF40-205ENST00000563909 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 FOXJ1Q92949 421 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 ERLEC1Q96DZ1 483 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
RNF40-205ENST00000563909 RPF1Q9H9Y2 349 aaKnown RBP17.02■□□□□ 0.32
RNF40-205ENST00000563909 COL12A1Q99715 3063 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 A0A1B0GTW7 788 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 E9PAM4 449 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 PYCARD-AS1I3L0S3 204 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 PLK4O00444 970 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 RRP8O43159 456 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 ADH1CP00326 375 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 NFICP08651 508 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 TXLNAP40222 546 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 ME1P48163 572 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 PDE6CP51160 858 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 SMAD1Q15797 465 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 KYAT1Q16773 422 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 HYIQ5T013 277 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 PCSK4Q6UW60 755 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 GPR155Q7Z3F1 870 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 KCNV2Q8TDN2 545 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 BICD1Q96G01 975 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 CALML4Q96GE6 196 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 HNRNPABQ99729 332 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 MMTAG2Q9BU76 263 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 CCSER1Q9C0I3 900 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 KCNG1Q9UIX4 513 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 FNDC3AQ9Y2H6 1198 aaKnown RBP17.01■□□□□ 0.31
RNF40-205ENST00000563909 PTPRQQ9UMZ3 2332 aa17.01■□□□□ 0.31
RNF40-205ENST00000563909 TEX51A0A1B0GUA7 166 aa17■□□□□ 0.31
RNF40-205ENST00000563909 A0A1W2PQF6 199 aa17■□□□□ 0.31
RNF40-205ENST00000563909 SLC9A3R1O14745 358 aaPredicted RBP17■□□□□ 0.31
RNF40-205ENST00000563909 FLRT2O43155 660 aa17■□□□□ 0.31
RNF40-205ENST00000563909 CER1O95813 267 aa17■□□□□ 0.31
RNF40-205ENST00000563909 ADRB2P07550 413 aa17■□□□□ 0.31
RNF40-205ENST00000563909 ADH5P11766 374 aa17■□□□□ 0.31
RNF40-205ENST00000563909 NDUFV2P19404 249 aa17■□□□□ 0.31
RNF40-205ENST00000563909 MATKP42679 507 aa17■□□□□ 0.31
RNF40-205ENST00000563909 TAF6P49848 677 aa17■□□□□ 0.31
RNF40-205ENST00000563909 SMTNP53814 917 aa17■□□□□ 0.31
RNF40-205ENST00000563909 SEMG2Q02383 582 aa17■□□□□ 0.31
RNF40-205ENST00000563909 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
RNF40-205ENST00000563909 TMEM132DQ14C87 1099 aa17■□□□□ 0.31
RNF40-205ENST00000563909 HLA-BQ31612 363 aa17■□□□□ 0.31
RNF40-205ENST00000563909 DBX2Q6ZNG2 339 aa17■□□□□ 0.31
RNF40-205ENST00000563909 PHTF2Q8N3S3 785 aa17■□□□□ 0.31
RNF40-205ENST00000563909 ZCCHC9Q8N567 271 aaKnown RBP17■□□□□ 0.31
RNF40-205ENST00000563909 SPIRE2Q8WWL2 714 aa17■□□□□ 0.31
RNF40-205ENST00000563909 ABCB6Q9NP58 842 aa17■□□□□ 0.31
RNF40-205ENST00000563909 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
RNF40-205ENST00000563909 PCDHA7Q9UN72 937 aa17■□□□□ 0.31
RNF40-205ENST00000563909 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
RNF40-205ENST00000563909 BTBD3Q9Y2F9 522 aa17■□□□□ 0.31
RNF40-205ENST00000563909 TLX3O43711 291 aaPredicted RBP16.99■□□□□ 0.31
RNF40-205ENST00000563909 FAM189A1O60320 539 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 PLS3P13797 630 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 NTSR1P30989 418 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
RNF40-205ENST00000563909 DHRS13Q6UX07 377 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 SCN4BQ8IWT1 228 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 CD302Q8IX05 232 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 NAT16Q8N8M0 369 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 NXPE2Q96DL1 559 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 EPSTI1Q96J88 318 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 MIR1-1HGQ9H1L0 117 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 CD93Q9NPY3 652 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 SMPD4Q9NXE4 827 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
RNF40-205ENST00000563909 MUC22E2RYF6 1773 aaPredicted RBP16.98■□□□□ 0.31
RNF40-205ENST00000563909 MEI4A8MW99 385 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 OGTO15294 1046 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 C10orf76Q5T2E6 689 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 IL27RAQ6UWB1 636 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 MIB1Q86YT6 1006 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 DNASE2BQ8WZ79 361 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 SLC6A17Q9H1V8 727 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 GTF3C4Q9UKN8 822 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 HCN2Q9UL51 889 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 TCHHQ07283 1943 aa16.98■□□□□ 0.31
RNF40-205ENST00000563909 KPNA7A9QM74 516 aa16.97■□□□□ 0.31
RNF40-205ENST00000563909 TNFSF14O43557 240 aa16.97■□□□□ 0.31
RNF40-205ENST00000563909 ACAT1P24752 427 aaKnown RBP16.97■□□□□ 0.31
RNF40-205ENST00000563909 LIG4P49917 911 aa16.97■□□□□ 0.31
RNF40-205ENST00000563909 BNC1Q01954 994 aa16.97■□□□□ 0.31
RNF40-205ENST00000563909 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms